Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 417 1e-111 seq5 248 1e-60 >seq4 Length=942658 Score = 417 bits (462), Expect = 1e-111 Identities = 1373/2130 (64%), Gaps = 35/2130 (2%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || || ||||||| || || || |||| || | | || ||||| || || || | Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920 || ||||||| || |||||||| || ||||| | |||| | || | Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTTTAGG 334513 Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980 ||||| ||||| ||| |||||| ||| |||| || ||||| |||||||| | || Sbjct 334512 TGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGATA 334453 Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040 || | |||||| | |||||||||| || || || | ||| || |||| ||||| | Sbjct 334452 ATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAATG 334393 Query 71041 TTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097 || | || ||||| || || || | |||||| || || || || ||| Sbjct 334392 TTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTTC 334333 Query 71098 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCA 71157 |||||| | || || |||| | | | ||| ||||| | || || || || Sbjct 334332 CATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACCG 334273 Query 71158 GACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCC 71217 | || ||||| | | ||||||||| ||| || ||||| | | ||||| | ||| Sbjct 334272 GCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACCC 334213 Query 71218 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCA 71277 |||||||||| ||| || ||||| ||||| ||||| || |||| | ||||| | |||| Sbjct 334212 AAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACCA 334153 Query 71278 TGTGATCGGA--TTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNN 71335 | ||| | || || |||| ||||||| ||| | || | ||| | | Sbjct 334152 AAC--TTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGG--CTTCTT 334097 Query 71336 NNNNNNNNNNNNNNNNNNNNATG--CCGTTACTAGCGTATGATCCTGCATATGTATCGTA 71393 || || | ||| || || ||| | || || || || Sbjct 334096 ACCCCACAAATCAAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATA 334037 Query 71394 TGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTC 71453 ||| || || || ||| || ||| ||| || || |||| | | || || ||||| Sbjct 334036 TGGACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTC 333977 Query 71454 GAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCT--ATCAAATGGATAATTTAAGAGA 71511 ||||| | | || || ||| || | |||| ||||||||| | |||| | Sbjct 333976 AAAAATTTGTATGTTTAGTTCTCTAGCCT--GGGCAGAATCAAATGGCAATCTTAACATC 333919 Query 71512 ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAA 71571 || || || || ||||| |||||||| |||| | | || ||||||| |||| | || || Sbjct 333918 ATGAAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGAT 333859 Query 71572 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACT 71631 || ||||||| || |||||||| || | || || || ||||| | ||| || | Sbjct 333858 CTTCTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCA 333799 Query 71632 ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC---------CATCTATT 71682 | |||||| | || | || ||| ||| | | | | | |||| || Sbjct 333798 ACAACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTT 333739 Query 71683 ACAA-ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739 ||| | | | | || ||||| ||||| | |||||||| || || || | | Sbjct 333738 TCAACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAA 333679 Query 71740 GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 71799 | |||| | ||| ||| || |||||| | | ||||| | || || || ||||| Sbjct 333678 GAGTATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGG 333619 Query 71800 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGA 71859 || || |||| || |||||||||||||| || || || ||||| ||||| |||| Sbjct 333618 TTGGATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGT 333559 Query 71860 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT--TT 71917 | ||| | ||| | | ||| | | ||||||| || | | || |||| || Sbjct 333558 GCTTCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGA--TCTACCTCTACCTT 333501 Query 71918 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAG 71977 || |||| |||| | |||||| |||||| || || || || ||| || || | Sbjct 333500 CTTTTTCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTG 333441 Query 71978 GACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGA 72037 | |||| | || | | | | ||| ||| || | | |||| ||||| || | Sbjct 333440 GGGCTTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATA 333381 Query 72038 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097 ||||| |||||| | || || | |||||| | ||| || || || || | Sbjct 333380 AATCAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGT 333321 Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157 | ||| ||| || | || | | |||||| | ||||| || || | |||| || | Sbjct 333320 TTTTTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAA 333261 Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217 | || || | |||||| || || ||||| | ||||||||||| || ||| | |||| Sbjct 333260 AGGCACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTC 333201 Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277 | | ||||||||| ||||| ||||||| ||| ||||| || | ||||| || | | Sbjct 333200 TAACCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCG 333141 Query 72278 CACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337 | ||||||| ||| || ||| || || || || | || || || | || ||| Sbjct 333140 ATCTAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATT 333081 Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 72397 ||||||| |||||||| || || || ||| |||||| ||| || || ||||| Sbjct 333080 GTTTTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAG 333021 Query 72398 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 72457 ||||||||| | | || || |||||||| || || |||||||| || ||||| Sbjct 333020 AAGACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGT 332961 Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTC 72517 || ||| ||||| |||||| || || |||||||| || |||||| ||| || | Sbjct 332960 ATCTTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATAC 332901 Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 72577 | || || || | ||| | || ||||||||||||||| | || | ||| | | ||| Sbjct 332900 CAACAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCA 332841 Query 72578 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 72635 |||| || ||| ||||||| ||||| ||||||||||||||||| ||||| |||| || Sbjct 332840 ACAAATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATC 332783 Query 72636 GTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT 72695 ||| |||| | | || ||| || ||| | || || ||| |||| | Sbjct 332782 ATAATGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATC 332723 Query 72696 TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCAT 72755 ||||| || ||||| ||||| || || || |||| ||||| ||| | || | || | Sbjct 332722 GGAAATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAAC 332663 Query 72756 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 72815 |||||| ||| |||| | |||| || || | || || | || | ||| || || Sbjct 332662 CACTTCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGC 332603 Query 72816 TAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGT 72875 | || || ||||||||||| || || | ||||| |||||||||| | | Sbjct 332602 CAAAACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTT 332543 Query 72876 GTCCAATTCTACCGTTGTTACTCCATTATA 72905 ||||| || ||||| | || |||| ||| Sbjct 332542 ATCCAACTCCACCGTGGAAACACCATCATA 332513 >seq5 Length=831479 Score = 248 bits (274), Expect = 1e-60 Identities = 602/895 (67%), Gaps = 34/895 (4%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || || | ||||| || || || ||||| || | || || || ||| Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 |||||||||||||| ||||| || || || || | || | | | || | ||||| | Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168 Query 41894 AA----TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 41948 || ||| || || | ||||| | |||| ||||| || ||||| || | Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108 Query 41949 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 42008 |||||| |||||||||| | || | | || ||||||||| || || ||| | Sbjct 305107 TAAGTTGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGA 305049 Query 42009 TAATAGATCTTA--CTGTTTCTTC-ACTCGGTGG-ATACAATAAATGTTTAAACATCAAA 42064 | |||||| | |||| | || | || || ||||| || | ||| Sbjct 305048 T----GATCTTGAGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAA 304993 Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || |||||| ||| | ||| |||||||| | |||||||||||||||||| || | Sbjct 304992 CAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAA 304933 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| | || | ||||| | ||| || || || ||||| ||||| || || ||| Sbjct 304932 CCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAG 304873 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGTCAT--- 42239 || ||||| || || |||||||||| | ||| || || |||| ||| | |||| Sbjct 304872 ATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGC 304815 Query 42240 GTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 42298 ||||| || || ||||| |||||||| | ||| | ||| || || |||| |||||| Sbjct 304814 ACATCCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCA 304756 Query 42299 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTAT 42356 || || | | | ||| || ||| || ||||| || || |||| || || ||| Sbjct 304755 TTGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT 304696 Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416 |||| ||||| |||||||| || || || || || |||||||| |||| || | Sbjct 304695 --GTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAG 304638 Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476 | || || || | | || |||| | ||||||||||| || || || || | Sbjct 304637 GGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAG 304578 Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTAT 42533 | |||||||| ||||| || | || ||| || |||||| ||| | || | Sbjct 304577 CAGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGT 304518 Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593 |||| || | | || ||||| | || | |||||| | ||||| || || ||||| | Sbjct 304517 TCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGG 304458 Query 42594 CCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 ||||||| ||||| | |||||| ||||| |||| |||||||| | |||||||| Sbjct 304457 CCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138889598120