Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq4 417 1e-111
seq5 248 1e-60
>seq4
Length=942658
Score = 417 bits (462), Expect = 1e-111
Identities = 1373/2130 (64%), Gaps = 35/2130 (2%)
Strand=Plus/Minus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| || ||||||| || || || |||| || | | || ||||| || || || |
Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920
|| ||||||| || |||||||| || ||||| | |||| | || |
Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTTTAGG 334513
Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980
||||| ||||| ||| |||||| ||| |||| || ||||| |||||||| | ||
Sbjct 334512 TGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGATA 334453
Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040
|| | |||||| | |||||||||| || || || | ||| || |||| ||||| |
Sbjct 334452 ATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAATG 334393
Query 71041 TTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTC 71097
|| | || ||||| || || || | |||||| || || || || |||
Sbjct 334392 TTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTTC 334333
Query 71098 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCA 71157
|||||| | || || |||| | | | ||| ||||| | || || || ||
Sbjct 334332 CATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACCG 334273
Query 71158 GACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCC 71217
| || ||||| | | ||||||||| ||| || ||||| | | ||||| | |||
Sbjct 334272 GCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACCC 334213
Query 71218 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCA 71277
|||||||||| ||| || ||||| ||||| ||||| || |||| | ||||| | ||||
Sbjct 334212 AAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACCA 334153
Query 71278 TGTGATCGGA--TTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNN 71335
| ||| | || || |||| ||||||| ||| | || | ||| | |
Sbjct 334152 AAC--TTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGG--CTTCTT 334097
Query 71336 NNNNNNNNNNNNNNNNNNNNATG--CCGTTACTAGCGTATGATCCTGCATATGTATCGTA 71393
|| || | ||| || || ||| | || || || ||
Sbjct 334096 ACCCCACAAATCAAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATA 334037
Query 71394 TGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTC 71453
||| || || || ||| || ||| ||| || || |||| | | || || |||||
Sbjct 334036 TGGACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTC 333977
Query 71454 GAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCT--ATCAAATGGATAATTTAAGAGA 71511
||||| | | || || ||| || | |||| ||||||||| | |||| |
Sbjct 333976 AAAAATTTGTATGTTTAGTTCTCTAGCCT--GGGCAGAATCAAATGGCAATCTTAACATC 333919
Query 71512 ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAA 71571
|| || || || ||||| |||||||| |||| | | || ||||||| |||| | || ||
Sbjct 333918 ATGAAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGAT 333859
Query 71572 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACT 71631
|| ||||||| || |||||||| || | || || || ||||| | ||| || |
Sbjct 333858 CTTCTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCA 333799
Query 71632 ATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC---------CATCTATT 71682
| |||||| | || | || ||| ||| | | | | | |||| ||
Sbjct 333798 ACAACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTT 333739
Query 71683 ACAA-ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739
||| | | | | || ||||| ||||| | |||||||| || || || | |
Sbjct 333738 TCAACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAA 333679
Query 71740 GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 71799
| |||| | ||| ||| || |||||| | | ||||| | || || || |||||
Sbjct 333678 GAGTATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGG 333619
Query 71800 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGA 71859
|| || |||| || |||||||||||||| || || || ||||| ||||| ||||
Sbjct 333618 TTGGATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGT 333559
Query 71860 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT--TT 71917
| ||| | ||| | | ||| | | ||||||| || | | || |||| ||
Sbjct 333558 GCTTCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGA--TCTACCTCTACCTT 333501
Query 71918 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAG 71977
|| |||| |||| | |||||| |||||| || || || || ||| || || |
Sbjct 333500 CTTTTTCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTG 333441
Query 71978 GACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGA 72037
| |||| | || | | | | ||| ||| || | | |||| ||||| || |
Sbjct 333440 GGGCTTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATA 333381
Query 72038 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097
||||| |||||| | || || | |||||| | ||| || || || || |
Sbjct 333380 AATCAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGT 333321
Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157
| ||| ||| || | || | | |||||| | ||||| || || | |||| || |
Sbjct 333320 TTTTTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAA 333261
Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217
| || || | |||||| || || ||||| | ||||||||||| || ||| | ||||
Sbjct 333260 AGGCACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTC 333201
Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277
| | ||||||||| ||||| ||||||| ||| ||||| || | ||||| || | |
Sbjct 333200 TAACCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCG 333141
Query 72278 CACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337
| ||||||| ||| || ||| || || || || | || || || | || |||
Sbjct 333140 ATCTAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATT 333081
Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 72397
||||||| |||||||| || || || ||| |||||| ||| || || |||||
Sbjct 333080 GTTTTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAG 333021
Query 72398 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 72457
||||||||| | | || || |||||||| || || |||||||| || |||||
Sbjct 333020 AAGACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGT 332961
Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTC 72517
|| ||| ||||| |||||| || || |||||||| || |||||| ||| || |
Sbjct 332960 ATCTTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATAC 332901
Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCA 72577
| || || || | ||| | || ||||||||||||||| | || | ||| | | |||
Sbjct 332900 CAACAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCA 332841
Query 72578 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTC 72635
|||| || ||| ||||||| ||||| ||||||||||||||||| ||||| |||| ||
Sbjct 332840 ACAAATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATC 332783
Query 72636 GTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT 72695
||| |||| | | || ||| || ||| | || || ||| |||| |
Sbjct 332782 ATAATGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATC 332723
Query 72696 TGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCAT 72755
||||| || ||||| ||||| || || || |||| ||||| ||| | || | || |
Sbjct 332722 GGAAATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAAC 332663
Query 72756 CACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGC 72815
|||||| ||| |||| | |||| || || | || || | || | ||| || ||
Sbjct 332662 CACTTCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGC 332603
Query 72816 TAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGT 72875
| || || ||||||||||| || || | ||||| |||||||||| | |
Sbjct 332602 CAAAACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTT 332543
Query 72876 GTCCAATTCTACCGTTGTTACTCCATTATA 72905
||||| || ||||| | || |||| |||
Sbjct 332542 ATCCAACTCCACCGTGGAAACACCATCATA 332513
>seq5
Length=831479
Score = 248 bits (274), Expect = 1e-60
Identities = 602/895 (67%), Gaps = 34/895 (4%)
Strand=Plus/Minus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|||||||| || || | ||||| || || || ||||| || | || || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893
|||||||||||||| ||||| || || || || | || | | | || | ||||| |
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168
Query 41894 AA----TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 41948
|| ||| || || | ||||| | |||| ||||| || ||||| || |
Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108
Query 41949 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 42008
|||||| |||||||||| | || | | || ||||||||| || || ||| |
Sbjct 305107 TAAGTTGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGA 305049
Query 42009 TAATAGATCTTA--CTGTTTCTTC-ACTCGGTGG-ATACAATAAATGTTTAAACATCAAA 42064
| |||||| | |||| | || | || || ||||| || | |||
Sbjct 305048 T----GATCTTGAGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAA 304993
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| || |||||| ||| | ||| |||||||| | |||||||||||||||||| || |
Sbjct 304992 CAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAA 304933
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| ||||| | || | ||||| | ||| || || || ||||| ||||| || || |||
Sbjct 304932 CCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAG 304873
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCACTGTCAT--- 42239
|| ||||| || || |||||||||| | ||| || || |||| ||| | ||||
Sbjct 304872 ATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGC 304815
Query 42240 GTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 42298
||||| || || ||||| |||||||| | ||| | ||| || || |||| ||||||
Sbjct 304814 ACATCCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCA 304756
Query 42299 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA--AAAGACTAT 42356
|| || | | | ||| || ||| || ||||| || || |||| || || |||
Sbjct 304755 TTGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT 304696
Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416
|||| ||||| |||||||| || || || || || |||||||| |||| || |
Sbjct 304695 --GTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAG 304638
Query 42417 TAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGG 42476
| || || || | | || |||| | ||||||||||| || || || || |
Sbjct 304637 GGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAG 304578
Query 42477 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTAT 42533
| |||||||| ||||| || | || ||| || |||||| ||| | || |
Sbjct 304577 CAGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGT 304518
Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593
|||| || | | || ||||| | || | |||||| | ||||| || || ||||| |
Sbjct 304517 TCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGG 304458
Query 42594 CCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648
||||||| ||||| | |||||| ||||| |||| |||||||| | ||||||||
Sbjct 304457 CCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138889598120
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