Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 113 7e-20
>seq4
Length=942658
Score = 113 bits (124), Expect = 7e-20
Identities = 334/501 (67%), Gaps = 32/501 (6%)
Strand=Plus/Plus
Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835
||||||||||||||||| | || ||||| ||||| || || ||||||| ||| | ||
Sbjct 334154 GGTTTGAGAAACTCTTTATTAGTTGCACCAATGCCAACTGCCTCCACTTCTCAAATTTTG 334213
Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTA--CCAGAGACGCACCCAGT 97893
|| | ||||| ||||||||| | ||| || || || || ||||| | ||
Sbjct 334214 GGTTACAATGAATGTTTTGAACCATACACCTCTAATATTTATTCCAGAAGAGTTTT-AGC 334272
Query 97894 CTGGAGAGTTTCA-ATTGACCAACGTGCACTTGGTTCGAGACTTGGA----ACGGCTCAA 97948
| || ||||| || |||| | | | || || | ||||||||| | || |
Sbjct 334273 C-GGTGAGTTCCAGATTGTTAACCCTT-ACATGTTGAGAGACTTGGTTGATATGGG---A 334327
Query 97949 TCTGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACAT 98008
| | ||||||||| |||| | || || | |||| ||||| ||||||||| |
Sbjct 334328 T-TATGGAACGATTCCATGAAGAACCACATTATTTCTGACAACGGGTCGATTCAAAACTT 334386
Query 98009 TACCATCATCCCGGAAGAGTTGCGCAGA-ATCTACAAGACTGTCTGGGAGATTCCGACCA 98067
| | ||| || |||| | | || ||||||||||| || ||||| || || |
Sbjct 334387 GCCTAACATTCCACAAGAAAT-CAAGGATATCTACAAGACAGTTTGGGAAATCTCGCAAA 334445
Query 98068 AGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCA 98127
|| | | ||||||||||||||||||||||||| ||||||||| |||||| |||
Sbjct 334446 AGTCTATTATCGATATGGCTGCCGACAGAGGTGCCTACATTGA------TCAATC--TCA 334497
Query 98128 A--TCTGTACGTTGCC-----GAGCCC-ACCTACAGTCGTATGACTTCGATACACTTTTA 98179
| | || || || | || ||| ||| || |||| ||||| || || ||
Sbjct 334498 AAGTATGAACATTCACCTAAAGAACCCTACCATGGGTAAACTGACATCGATGCATTTCTA 334557
Query 98180 CGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCCACCAA 98239
| |||||| ||||| | ||||| || ||||| || ||||||| | | || ||
Sbjct 334558 TGGATGGAAGAAGGGATTGAAGACTGGTATGTATTACTTGAGAACTCAAGCTGCTGCCGC 334617
Query 98240 TGCCATACCATTTACGGTGGA 98260
|||||| | ||| || || ||
Sbjct 334618 TGCCATTCAATTCACTGTCGA 334638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058857260120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |