Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 113 7e-20 >seq4 Length=942658 Score = 113 bits (124), Expect = 7e-20 Identities = 334/501 (67%), Gaps = 32/501 (6%) Strand=Plus/Plus Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835 ||||||||||||||||| | || ||||| ||||| || || ||||||| ||| | || Sbjct 334154 GGTTTGAGAAACTCTTTATTAGTTGCACCAATGCCAACTGCCTCCACTTCTCAAATTTTG 334213 Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTA--CCAGAGACGCACCCAGT 97893 || | ||||| ||||||||| | ||| || || || || ||||| | || Sbjct 334214 GGTTACAATGAATGTTTTGAACCATACACCTCTAATATTTATTCCAGAAGAGTTTT-AGC 334272 Query 97894 CTGGAGAGTTTCA-ATTGACCAACGTGCACTTGGTTCGAGACTTGGA----ACGGCTCAA 97948 | || ||||| || |||| | | | || || | ||||||||| | || | Sbjct 334273 C-GGTGAGTTCCAGATTGTTAACCCTT-ACATGTTGAGAGACTTGGTTGATATGGG---A 334327 Query 97949 TCTGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACAT 98008 | | ||||||||| |||| | || || | |||| ||||| ||||||||| | Sbjct 334328 T-TATGGAACGATTCCATGAAGAACCACATTATTTCTGACAACGGGTCGATTCAAAACTT 334386 Query 98009 TACCATCATCCCGGAAGAGTTGCGCAGA-ATCTACAAGACTGTCTGGGAGATTCCGACCA 98067 | | ||| || |||| | | || ||||||||||| || ||||| || || | Sbjct 334387 GCCTAACATTCCACAAGAAAT-CAAGGATATCTACAAGACAGTTTGGGAAATCTCGCAAA 334445 Query 98068 AGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCA 98127 || | | ||||||||||||||||||||||||| ||||||||| |||||| ||| Sbjct 334446 AGTCTATTATCGATATGGCTGCCGACAGAGGTGCCTACATTGA------TCAATC--TCA 334497 Query 98128 A--TCTGTACGTTGCC-----GAGCCC-ACCTACAGTCGTATGACTTCGATACACTTTTA 98179 | | || || || | || ||| ||| || |||| ||||| || || || Sbjct 334498 AAGTATGAACATTCACCTAAAGAACCCTACCATGGGTAAACTGACATCGATGCATTTCTA 334557 Query 98180 CGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCCACCAA 98239 | |||||| ||||| | ||||| || ||||| || ||||||| | | || || Sbjct 334558 TGGATGGAAGAAGGGATTGAAGACTGGTATGTATTACTTGAGAACTCAAGCTGCTGCCGC 334617 Query 98240 TGCCATACCATTTACGGTGGA 98260 |||||| | ||| || || || Sbjct 334618 TGCCATTCAATTCACTGTCGA 334638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058857260120