Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq5 233 2e-56
>seq5
Length=831479
Score = 233 bits (258), Expect = 2e-56
Identities = 500/733 (68%), Gaps = 28/733 (4%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || ||| ||||| |||||||| ||||| || || || |||| || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTT---ACACCCTAATTCTAGT 12976
||||| ||||| ||||||||| | || | |||| | || ||| || | ||
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTG--ACGTT-GTATCTCTTGTCACAACCAAG----AGA 305171
Query 12977 AACAA----TCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCC 13032
||||| |||||| |||||||| || | || || ||| ||||| |||||| ||
Sbjct 305170 AACAAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACC 305111
Query 13033 TATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGAT 13092
| ||| || | || | ||| ||||| ||| | ||| ||| || ||||| |||||
Sbjct 305110 AAGTAAGTTGGCTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTT- 305052
Query 13093 AACTATGTCTCTT-ATTACGTTCTCTAA---TGGAGGATTTGATAGATGCTTAAACATCA 13148
| ||| |||| | ||| ||| | ||| | ||| | ||| || | |
Sbjct 305051 --CGATGA-TCTTGAGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATA 304995
Query 13149 TACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTA 13208
||| |||||||| ||| || ||||||||||| | |||| ||||| |||||||| |
Sbjct 304994 AACAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCA 304935
Query 13209 GACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaa 13268
||| ||||| | |||| |||||| | ||| || || | ||||||||| || || ||||
Sbjct 304934 AACCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAA 304875
Query 13269 aTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACC--ATACGTACTATTTTTACT 13326
| || |||||||| || ||||| || | || |||||||| ||| | | ||||| | |
Sbjct 304874 AGATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATA-ATGC-ATTTTCA-T 304818
Query 13327 CTC-TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTG 13385
| | ||||| | ||||||||| || |||| ||||| || || ||||| || |
Sbjct 304817 CGCACATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGG 304758
Query 13386 CGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTAT 13445
| || ||||| | | |||||| || | ||| || || ||||||||| |
Sbjct 304757 CATTGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGT 304698
Query 13446 ACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTG 13505
| |||| ||||| || ||||||||| |||||||||||||| ||||| | || || |
Sbjct 304697 ATGTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAG 304638
Query 13506 ATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAG 13565
| || || || | | || |||| | || |||||||| || || || || ||
Sbjct 304637 GGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAG 304578
Query 13566 CAGCaaaaaaaGC 13578
|||||||||| ||
Sbjct 304577 CAGCAAAAAAGGC 304565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982205653874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |