Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq5 244 2e-59
seq2 154 3e-32
seq6 136 9e-27
>seq5
Length=831479
Score = 244 bits (270), Expect = 2e-59
Identities = 589/871 (68%), Gaps = 23/871 (3%)
Strand=Plus/Plus
Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759
||||||||| | || ||||| | | ||| || ||| ||||||||| ||||||
Sbjct 304403 AGATTTGTGCTCTTCCCAATCAAATACCATGAAATCTGGCAAATGTACAAAAAGGCCGAA 304462
Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819
|| ||||| ||||| | |||||| | || ||||| | |||||| || ||||| ||
Sbjct 304463 GCGTCTTTCTGGACCGCCGAAGAAATTGACTTGTCTAAGGACTTACACGACTGGAACAAC 304522
Query 268820 TTA--AAACCAGAA-GAAAGAAGATTTATATCTTATATTCTTG-CGTTTTTTGCAGTTAG 268875
| ||| | || |||||| || || | | | | ||| | |||||||| | |
Sbjct 304523 AGACTAAATGATAACGAAAGATTTTTCATTACC-AGAGTGTTGGCCTTTTTTGCTGCTTC 304581
Query 268876 TGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGA 268935
|||||||| || ||||||||| | || || || |||| ||||| || || |||||
Sbjct 304582 AGATGGTATTGTCAACGAAAATTTGGTTGAAAACTTCTCGGCTGAGGTGCAAATCCCTGA 304641
Query 268936 AGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAG 268995
||||| ||||| || || ||||| || || ||||| || ||||| || | |||
Sbjct 304642 AGCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATCCATTCGGAAACATACTC 304701
Query 268996 TCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTAT 269055
|||| || || || ||| | | ||| || ||| | || |||| | | ||
Sbjct 304702 CTTATTGATTGACACCTATGTCAAGGATCCAAAGGAATCGGAATTCTTATTCAATGCCAT 304761
Query 269056 -GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT- 269113
|| ||| | | ||| | | | |||| | || ||||| ||| |||||| ||||
Sbjct 304762 TGAAAACATTCCA-TGTATTAAAGAAAAGGCCGACTGGGCCATGAGATGGATGTGCGATG 304820
Query 269114 AGCGCGCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTT 269171
| || ||| ||| ||||| |||||||| ||||||||||| |||||||| || || |
Sbjct 304821 AAAATGCATTATTCGGTGAAAGATTAGTTGCCTTTGCCGCTGTTGAAGGTATCTTTTTCT 304880
Query 269172 CGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTT 269231
| || || ||||| | || || |||||||| |||||||| | |||||||| || || |
Sbjct 304881 CCGGATCGTTTGCTTCCATTTTCTGGTTGAAAAAAAGAGGTTTGATGCCAGGTTTGACAT 304940
Query 269232 TCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTAT 269291
| || |||||||| || |||| || |||||||||||| ||| || |||||||||||||
Sbjct 304941 TTTCCAACGAATTAATTTGCAGAGATGAAGGTTTACACACCGATTTTGCTTGTTTATTAT 305000
Query 269292 TTACTAATT--ATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTC 269349
| | ||| | | | | || | ||| |||||| || | | || || ||
Sbjct 305001 TCTCCCATTTGAACAATACCCCAGA--TTC-CAAGAT--CGTGCTCAAGATCATCGAAGA 305055
Query 269350 AGCTGTTTCTGTAGAA-ACAGA-ATTTCTAACGGAAGCTCTATCTATCGATCTTA-TCGG 269406
||||||| | ||| | ||| ||||| || || ||||| || | | | |||| | ||
Sbjct 305056 AGCTGTTGAAATTGAACAAAGATATTTC--ACAGACGCTCT-TCCAGCCAACTTACTTGG 305112
Query 269407 TATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTC 269466
|||||| | | | |||| ||||| | | || || | || ||| | || || ||
Sbjct 305113 TATGAACAAAGATTTGATGTGTCAATATGTCGAATTTGTTGCCGACAGACTTCTTGTTTC 305172
Query 269467 TTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATC 269526
| | || | | || | ||| ||||| |||||| ||| ||| ||||| || || ||
Sbjct 305173 TCTTGGTTGTGACAAGAGATACAACGTCACAAATCCTTTTGATTTCATGGAAAACATCTC 305232
Query 269527 ATTAGAAGGTAAGGCTAATTTCTTCGAGAAG 269557
|||| |||||| | || ||||| || |||
Sbjct 305233 TTTAGCTGGTAAGACCAACTTCTTTGAAAAG 305263
Score = 134 bits (148), Expect = 3e-26
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||||| || | || | || | || ||||| || || || || |||||
Sbjct 265674 ATACCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCG 265615
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|||| |||||||||||||||| ||| || ||||| || || | || ||||| |||||
Sbjct 265614 GATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGT 265555
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| ||||| || |||||| || || || || | |||||| || |||
Sbjct 265554 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCA 265495
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| |||| || || ||||||||||| | || || ||||| || ||||| |||
Sbjct 265494 ACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTG 265441
>seq2
Length=1335671
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || || || || |||||||||| |||||||||||||| | ||| || |||
Sbjct 5035 GTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCA 4976
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| |||| || ||||| ||||| || || ||||| || || || |||||| ||
Sbjct 4975 GCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTTTGCTTG 4916
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || ||| || || || ||||| |||||||| ||||| |||
Sbjct 4915 ACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAATGGTCTTACCGGTAAGGGTT 4856
Query 104543 TTTACAAATATCTGCATTTT 104562
|| || || || ||||||||
Sbjct 4855 TTAACGAAAATTTGCATTTT 4836
>seq6
Length=817167
Score = 136 bits (150), Expect = 9e-27
Identities = 134/173 (77%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 104387 TCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCA 104446
|| ||||| ||||| |||||||| | ||||| |||||||| || | |||||||| |||
Sbjct 642546 TCTGATAGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCA 642487
Query 104447 GGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT 104506
|| || || ||||| || ||||||||||| ||| ||||| || | ||| || |
Sbjct 642486 GGTGGAATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGAC 642427
Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||||||| || ||||| ||||| |||||||| || ||||| ||||||||
Sbjct 642426 TCCACCTCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374
Score = 105 bits (116), Expect = 2e-17
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 104327 TTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAG 104386
||| | || ||||| | || | || | ||| | ||| |||||||| ||||| || ||
Sbjct 643133 TTTGTACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTAR 643074
Query 104387 TCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCA 104446
|| || || ||||| ||||| |||| ||| || || ||||| || | |||||||| |||
Sbjct 643073 TCYGAKAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCA 643014
Query 104447 GGAGGTATTCCTTCTTTATCCTGAATCTT 104475
|| || || ||||| || |||||||||||
Sbjct 643013 GGTGGAATACCTTCCTTGTCCTGAATCTT 642985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397854165196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |