Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq5 156 5e-33 >seq5 Length=831479 Score = 156 bits (172), Expect = 5e-33 Identities = 395/593 (67%), Gaps = 22/593 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || || ||||| | || | ||||| || ||| || || || ||||| ||| || Sbjct 673785 AAATTCGAAGATCTAGGTATTGGTGGGCTGGATACCGAGTTCACTGCCATTTTTAGAAGA 673726 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 |||||||| |||||| ||||| | |||| ||||| | || | ||| | Sbjct 673725 GCATTTGCCTCTAGAATCTTTCCTCCAGGGGTAATTGAAAAAATGGGTATGACCCATGTC 673666 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 || || || ||| | |||| || || ||| ||||| || ||||| || | ||| Sbjct 673665 AAGGGTATGTTACTTTATGGTCCCCCGGGTACAGGTAAGACCTTAATTGCAAGGCAAATT 673606 Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 | | ||| | || ||| || || || ||||||||| ||||| |||||| | ||| Sbjct 673605 GGT-AAGATGTTGAAT-GCAAAGGAGCC--TAAAATTGTCAATGGGCCTGAAATTTTGTC 673550 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 |||||| || ||| |||||||| ||| || | || || || |||| || ||||| || Sbjct 673549 CAAATACGTTGGTTCGTCAGAAGAGAATATTCGTAATTTATTCAAGGATGCAGAAGACGA 673490 Query 164694 ACAAAAGAAAGCAGGTTTAGC-TAGTAAATTACATGTTATTGTTTTTGATGAGATAGATG 164752 | | ||||| |||| || | || | || ||| | ||| |||| ||||| ||||| Sbjct 673489 ATACAAGAAGAAAGGTGATGCGTCGTCA-TTGCATATCATTATTTTCGATGAATTAGATT 673431 Query 164753 CTCTTTGCAAAAAACGTGGT---------GAT--AATAT-TATTCATGATGCAGTGGTTA 164800 || ||| ||| || | ||| ||| || | | | |||| ||||| | Sbjct 673430 CTGTTTTTAAACAAAGAGGTTCTAGAGGCGATGGAACAGGTGTGGCTGATAATGTGGTGA 673371 Query 164801 ATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTA 164860 |||| ||||| | ||||| |||||||| || || || ||||| || | | || | Sbjct 673370 ATCAATTGCTAGCCAAAATGGATGGTGTCGACCAATTGAACAATATCTTGGTCATTGGAA 673311 Query 164861 TGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGA 164920 |||||||| ||| ||||||||||||| ||| ||| || |||| ||| |||| ||| | Sbjct 673310 TGACCAACAGACGTGATTTAATTGATAGTGCCTTACTAAGACCGGGTAGATTTGAAGTTC 673251 Query 164921 AAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTT 164973 | | ||||| ||||| || |||| || | | |||||||| ||| || Sbjct 673250 AGGTCGAAATTCATTTACCAGATGAAGAGGGCAGATTGCAAATTTTGAAAATT 673198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871724409200