Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq5 96.9 3e-15 seq6 82.4 7e-11 >seq2 Length=1335671 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||||| ||| || ||||| | || ||||||||||| | ||| || || Sbjct 5065 CCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAG-- 5008 Query 94841 ATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| ||| | || |||| || || || |||||||||||||||| || || || | Sbjct 5007 ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTG 4948 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| ||||| | || ||| |||||| | | | ||||| | |||| Sbjct 4947 GAATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGA 4888 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||| || ||||| || || ||||| ||||| || || || ||||| Sbjct 4887 CTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCAT 4839 >seq5 Length=831479 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| |||||||||||| | ||| ||||||||||| | ||| || ||| Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCG--G 265614 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| ||| | || || | || || || | ||||| |||||||| || || || | Sbjct 265613 ATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTG 265554 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | |||||||| || || | || ||| ||||||| | | | || |||| || | Sbjct 265553 GGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAA 265494 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| || ||||| | || || ||||| || ||||| Sbjct 265493 CTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 265445 >seq6 Length=817167 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||| |||||| || ||||||| ||||| || || || || ||||||||||| ||| Sbjct 642528 TCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTG 642469 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || || || | | | ||||| | || || || | ||||| Sbjct 642468 TCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGACTCCACCTCTAGGGTGATA 642409 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || ||||| || || |||||||||||||| Sbjct 642408 GTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290992665320