Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-24 seq6 113 7e-21 >seq1 Length=3254712 Score = 125 bits (138), Expect = 1e-24 Identities = 179/251 (71%), Gaps = 1/251 (0%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||| |||||||||| ||||| |||||||||||||||||| | | | || | Sbjct 3201235 AGAT-TCTTAGAGATAACATTCAAGGTATCACCAAGCCAGCTATCAGAAGATTAGCAAGA 3201177 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| |||||| | | |||| | |||| ||||| | | | |||||||||| Sbjct 3201176 AGAGGTGGTGTCAAGAGAATTTCTGCTCTTATCTACGAAGAAGTCAGAGCTGTTTTGAAG 3201117 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | ||||| | | ||| ||| || ||| || |||||||| ||||| || | ||| Sbjct 3201116 ACTTTCCTTGAAAACGTCATCAGGGACGCTGTCACTTATACCGAACACGCCAAGAGAAAG 3201057 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 |||||||| || | ||| |||| || || ||||| | ||||| | | |||||||| Sbjct 3201056 ACTGTCACTTCTCTTGATGTCGTTTACGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 3200997 Query 16688 TTTGGAAGTTA 16698 || || |||| Sbjct 3200996 TTCGGTGGTTA 3200986 >seq6 Length=817167 Score = 113 bits (124), Expect = 7e-21 Identities = 177/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| ||| |||||||||| ||||| |||||||||||||||||| | | | || | Sbjct 733530 AGAT-TCTCAGAGATAACATTCAAGGTATCACCAAGCCAGCTATCAGAAGATTAGCAAGA 733588 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| |||||| | |||||| | | || ||||| | | | ||||||||| Sbjct 733589 AGAGGTGGTGTCAAGAGAATCTCTGCTCTTATTTACGAAGAAGTCAGAGCCGTTTTGAAG 733648 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | |||||| | | ||| ||| ||||| || ||||| || ||||| || | ||| Sbjct 733649 ACCTTCCTTGAAAACGTCATCAGAGATGCCGTCACTTATACTGAACACGCCAAGAGAAAG 733708 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 |||||||| ||| | || | || || || || || | |||||| | | |||||||| Sbjct 733709 ACTGTCACTTCCCTCGACGTTGTTTACGCCTTAAAGAGACAAGGCAGAACCCTTTATGGT 733768 Query 16688 TTTGGAAGTTAA 16699 || || ||||| Sbjct 733769 TTCGGTGGTTAA 733780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075166170641