Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 1e-24
seq6 113 7e-21
>seq1
Length=3254712
Score = 125 bits (138), Expect = 1e-24
Identities = 179/251 (71%), Gaps = 1/251 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| |||| |||||||||| ||||| |||||||||||||||||| | | | || |
Sbjct 3201235 AGAT-TCTTAGAGATAACATTCAAGGTATCACCAAGCCAGCTATCAGAAGATTAGCAAGA 3201177
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | | |||| | |||| ||||| | | | ||||||||||
Sbjct 3201176 AGAGGTGGTGTCAAGAGAATTTCTGCTCTTATCTACGAAGAAGTCAGAGCTGTTTTGAAG 3201117
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| | | ||| ||| || ||| || |||||||| ||||| || | |||
Sbjct 3201116 ACTTTCCTTGAAAACGTCATCAGGGACGCTGTCACTTATACCGAACACGCCAAGAGAAAG 3201057
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|||||||| || | ||| |||| || || ||||| | ||||| | | ||||||||
Sbjct 3201056 ACTGTCACTTCTCTTGATGTCGTTTACGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 3200997
Query 16688 TTTGGAAGTTA 16698
|| || ||||
Sbjct 3200996 TTCGGTGGTTA 3200986
>seq6
Length=817167
Score = 113 bits (124), Expect = 7e-21
Identities = 177/252 (70%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| ||| |||||||||| ||||| |||||||||||||||||| | | | || |
Sbjct 733530 AGAT-TCTCAGAGATAACATTCAAGGTATCACCAAGCCAGCTATCAGAAGATTAGCAAGA 733588
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||||| | | || ||||| | | | |||||||||
Sbjct 733589 AGAGGTGGTGTCAAGAGAATCTCTGCTCTTATTTACGAAGAAGTCAGAGCCGTTTTGAAG 733648
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| |||||| | | ||| ||| ||||| || ||||| || ||||| || | |||
Sbjct 733649 ACCTTCCTTGAAAACGTCATCAGAGATGCCGTCACTTATACTGAACACGCCAAGAGAAAG 733708
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|||||||| ||| | || | || || || || || | |||||| | | ||||||||
Sbjct 733709 ACTGTCACTTCCCTCGACGTTGTTTACGCCTTAAAGAGACAAGGCAGAACCCTTTATGGT 733768
Query 16688 TTTGGAAGTTAA 16699
|| || |||||
Sbjct 733769 TTCGGTGGTTAA 733780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075166170641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |