Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq5 223 4e-53
>seq5
Length=831479
Score = 223 bits (246), Expect = 4e-53
Identities = 589/894 (66%), Gaps = 29/894 (3%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
||||| ||||| ||||| ||||| || || || ||||| || | || || || |
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304
||||| |||||||| |||||| || || | || | |||||| || | ||
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAA-ACAAG 305165
Query 21305 AA-TCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAA 21363
|| ||| || || |||||||| | |||||||||||| || || |||||||| | ||
Sbjct 305164 AAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAA 305105
Query 21364 TTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTAT 21423
|| | |||||||| | ||| ||| | || ||| || || ||||| | || ||
Sbjct 305104 GTTGGCTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGAT 305045
Query 21424 ATTTATTA---TCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGC 21480
|| | | || | || || |||| || || || || | ||||| ||
Sbjct 305044 CTTGAGCACGATCTTGGAAT--CT-GGGGTATTGTTCAAATGGGAGAATAATAAACAAGC 304988
Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540
|||||| || ||||||||||| || | |||||||| || |||||||| ||||| ||
Sbjct 304987 AAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGG 304928
Query 21541 CATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCC 21600
||| || ||||| ||||| ||||| || || || ||||| | ||| || || || || ||
Sbjct 304927 CATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACC 304868
Query 21601 CTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCA 21660
||||| || ||||| |||||||||| ||||||| || | | || ||| | |||||
Sbjct 304867 TTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCA 304808
Query 21661 TTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AA 21719
| | ||||| | ||||||||||||||||| ||| | ||||| || || || ||
Sbjct 304807 TCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAA 304748
Query 21720 GA----TGAtt--ttt--ttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATA 21771
|| |||| ||| || | |||| ||| | |||
Sbjct 304747 GAATTCCGATTCCTTTGGATCCTTGACATAGGT-------GTCAATCAATAAGGAGTAT- 304696
Query 21772 CATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGA 21831
|||| ||||| || ||||| ||| || || || || || ||||| | || || |
Sbjct 304695 -GTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGG 304637
Query 21832 ACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGC 21891
||| ||||| | | || || | |||| ||||| || || || ||||| ||
Sbjct 304636 GATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGC 304577
Query 21892 GGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTT 21948
|||||||| ||||| | | | || ||| ||| ||||||||| ||| | || ||
Sbjct 304576 AGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTT 304517
Query 21949 CCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGC 22008
||| || ||| || || || || || | |||||| | ||||| || || ||
Sbjct 304516 CCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGC 304457
Query 22009 CTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062
|||||| ||||| |||||| |||| ||| | ||||| || | ||||| ||
Sbjct 304456 CTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900553995880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |