Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq4 439 3e-118
seq5 239 6e-58
>seq4
Length=942658
Score = 439 bits (486), Expect = 3e-118
Identities = 1377/2127 (65%), Gaps = 29/2127 (1%)
Strand=Plus/Minus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||||||||||| ||||| || | || || | | || ||||| || || || |
Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 62113
|| ||||||| || |||||||| || ||||| || || ||| ||
Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTT-TAG 334514
Query 62114 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173
|| || |||||| |||| |||||| ||| |||| || ||||| |||||||| | ||
Sbjct 334513 GTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGAT 334454
Query 62174 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62233
|| | |||||| | |||||||||| || || || | ||| || |||| |||||
Sbjct 334453 AATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAAT 334394
Query 62234 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62290
||| | || ||||| || || || | ||||| ||||| || ||| ||
Sbjct 334393 GTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTT 334334
Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350
||||||| | || || |||| | | | || ||||| | || || || ||
Sbjct 334333 CCATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACC 334274
Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410
| || ||||| | | ||||||||| ||| || ||||| | | ||||| | ||
Sbjct 334273 GGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACC 334214
Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62470
||||||||||| ||| || ||||| ||||| ||||| || |||||| ||||| | |||
Sbjct 334213 CAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACC 334154
Query 62471 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAACN 62528
| | || || || |||| ||||||| ||| | || | || | ||
Sbjct 334153 AAACTTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACC 334094
Query 62529 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 62588
||||| | ||| | ||| || || ||| | || || || |||
Sbjct 334093 CCACAAATCAAA--TTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATAT 334036
Query 62589 GGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 62648
|| || || | || || ||| ||| || || |||| | ||| || || |||||
Sbjct 334035 GGACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCA 333976
Query 62649 AAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCT--ATCAAATGGATAATTTAAGAGAA 62706
|| || | | ||||| ||| || | ||| ||||||||| | |||| | |
Sbjct 333975 AAAATTTGTATGTTTAGTTCTCTAGCCTG--GGCAGAATCAAATGGCAATCTTAACATCA 333918
Query 62707 TAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62766
| || || || ||||| |||||||| |||| | | || ||||| | |||| | || ||
Sbjct 333917 TGAAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATC 333858
Query 62767 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAA 62826
|| ||||||| || |||||||| || | || || || ||||| | ||| || |||
Sbjct 333857 TTCTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAA 333798
Query 62827 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CATCTATTA 62877
|||||| | || | | ||| ||| | | | | | |||| ||
Sbjct 333797 CAACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTTT 333738
Query 62878 CAA-ACATGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 62934
||| | ||| | || ||||| ||||| | |||||||| || || || | | |
Sbjct 333737 CAACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAAG 333678
Query 62935 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGAT 62994
|||| | |||||| || |||||| | | ||||| | || || || ||||| |
Sbjct 333677 AGTATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGT 333618
Query 62995 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 63054
| || |||| || |||||||||||||| |||||||| ||||| ||||| |||| |
Sbjct 333617 TGGATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTG 333558
Query 63055 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC 63114
||| | ||| | | ||| | | ||||||| || | ||| | ||| | ||||
Sbjct 333557 CTTCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGATCTACCTCTACCTTCTT 333498
Query 63115 TTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGAC 63174
|||| ||| | || ||| |||||| || || || |||||| ||| || ||
Sbjct 333497 TTTCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTGGGG 333438
Query 63175 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63234
|||| || | | | | ||| ||| | | | |||| ||||| || | ||
Sbjct 333437 CTTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAAT 333378
Query 63235 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294
||| |||||| | || || | |||||| | ||| ||| || || || || |
Sbjct 333377 CAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGTTTT 333318
Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354
|| ||| || | || | | |||||| | ||||| || || | |||| || |
Sbjct 333317 TTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAAAGG 333258
Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414
| ||||| | |||||| || || ||||| | ||||||||||| || ||| | ||||| |
Sbjct 333257 CACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTCTAA 333198
Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCAC 63474
||||||||| |||||||| ||| |||| |||||||| | ||||| || | | |
Sbjct 333197 CCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCGATC 333138
Query 63475 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63534
|||||| ||| || ||| || || || || | || || || | || ||| |||
Sbjct 333137 TAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATTGTT 333078
Query 63535 TTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAG 63594
|||| || ||||| ||||| || || |||||| ||| || || ||||| ||
Sbjct 333077 TTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAGAAG 333018
Query 63595 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATT 63654
||||||| | | || || |||||||| || || |||||||| || ||||| ||
Sbjct 333017 ACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGTATC 332958
Query 63655 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63714
||| ||| | |||||| || || |||||||| | |||||| |||||| || |
Sbjct 332957 TTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATACCAA 332898
Query 63715 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63774
| || || | ||| | || |||||||||||||| | || | || | | ||||||
Sbjct 332897 CAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCAACA 332838
Query 63775 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 63832
| || ||| ||||||| ||||| ||||||||||||||||| ||||| |||| || ||
Sbjct 332837 AATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCATA 332780
Query 63833 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGA 63892
| |||| | || || ||| || ||| | || || ||| |||| | ||
Sbjct 332779 ATGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATCGGA 332720
Query 63893 AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 63952
||| || ||||| ||||| || || || |||| ||||| ||| | || | || | |||
Sbjct 332719 AATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAACCAC 332660
Query 63953 TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAG 64012
||| ||| |||| | |||| || || | || || | || | ||| || || |
Sbjct 332659 TTCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGCCAA 332600
Query 64013 AATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTC 64072
|| || ||||| ||||| || || | ||||| |||| ||||| | | ||
Sbjct 332599 AACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTTATC 332540
Query 64073 CAATTCTACCGTTGTTACTCCATTATA 64099
||| || ||||| | || |||| |||
Sbjct 332539 CAACTCCACCGTGGAAACACCATCATA 332513
>seq5
Length=831479
Score = 239 bits (264), Expect = 6e-58
Identities = 600/894 (67%), Gaps = 32/894 (4%)
Strand=Plus/Minus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|||||||| || || | ||||| || || || || || || | || || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
|||||||||||||| ||||| || || || || | || | | | || | ||||| |
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168
Query 33133 AA----TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 33187
|| ||| || || || ||||| | |||| ||||| || ||||| || |
Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108
Query 33188 TAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 33247
|||||| |||||||||| | || | | || ||||||||| || || ||| |
Sbjct 305107 TAAGTTGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGA 305049
Query 33248 TAATA--GATCTAACGGTTTCTTCACTCGGTGG-ATGCAATAAATGTTTAAACATCAAAC 33304
| || || | ||| | | | | || | || || ||||| || | ||||
Sbjct 305048 TGATCTTGAGC--ACGATCT-TGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAAC 304992
Query 33305 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTC 33364
| || |||||| ||| | ||| || ||||| | ||||| |||||||||||| || | |
Sbjct 304991 AAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAAC 304932
Query 33365 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGA 33424
| ||||| | || | ||||| | ||| || |||||||| || ||||| || || ||||
Sbjct 304931 CTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGA 304872
Query 33425 TTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTGTCAT---G 33479
| ||||| || || |||||||||| | ||| || || |||| || | ||||
Sbjct 304871 TACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGCA 304814
Query 33480 TATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33538
||||| || || ||||| |||||||| | ||| | ||| || || |||| |||||||
Sbjct 304813 CATCCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCAT 304755
Query 33539 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA--AAAGACTATA 33596
| || | | | ||| || ||| || ||||| || || |||| || || |||
Sbjct 304754 TGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT- 304696
Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656
|||||||||| |||||||| || || || || || |||||||| | || || |
Sbjct 304695 -GTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGG 304637
Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716
|| || || || | | || ||| |||||||||| || || || || || ||
Sbjct 304636 GATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGC 304577
Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATT 33773
|||||||| ||||| || | || ||| || |||||| ||||| || ||
Sbjct 304576 AGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTT 304517
Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833
||| || | | || ||||| | || | |||||| | ||||| || || || || ||
Sbjct 304516 CCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGC 304457
Query 33834 CTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
|||||| ||||| | |||||| |||| |||| ||||||||| | ||||||||
Sbjct 304456 CTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946911886920
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