Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 235 1e-56 seq5 149 2e-30 >seq4 Length=942658 Score = 235 bits (260), Expect = 1e-56 Identities = 816/1251 (65%), Gaps = 44/1251 (4%) Strand=Plus/Plus Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150 ||| | |||||||||||| | || || || | || || | || | |||||||||| | Sbjct 332507 GGTGTGTATGATGGTGTTTCCACGGTGGAGTTGGATAACTTAGCAGCAGAAACTGCAGCA 332566 Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210 ||| |||||| | ||||| |||||| | |||| || | | || |||| | Sbjct 332567 TATATGACCACCATCCATCCAGATTACGCAGTTTTGGCAGCAAGAGTGGCGATTTC-TAA 332625 Query 363211 CTT-CATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGT 363269 ||| || ||| || |||| || || ||| || | || |||| || ||||| Sbjct 332626 CTTGCAAAAACAAACCACAAAAAAATTCTCCGAAGTGGTTGACCAATTGTACAAATATGT 332685 Query 363270 CAATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCG 363329 | || |||||| |||||| || ||| | ||| ||||||||| ||| | ||| Sbjct 332686 CGATCCAAAGAACGGTAAACACTCTCCAATGATTTCCGATGACACCTGGGAAATTGTCCA 332745 Query 363330 TTCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TA 363388 ||||| || ||| | || |||| ||| ||||||| | ||| || | || | || Sbjct 332746 AAAAAATGCTGATGTTCTTGACGACGCTATTCATTATGATAGAGATTTCAACTACAACTA 332805 Query 363389 TTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTG 363448 |||| || | || ||| |||| | ||| || | | | | |||||| | |||| | Sbjct 332806 TTTT-GGTTTCAAAACGTTGGAAAGATCTTATTTGTTGAGATTGAATGGTCAAATTGCAG 332864 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 || | || |||||| || | ||| | |||||| ||||||| ||| | ||| | | Sbjct 332865 AAAGACCTCAGCATTTGATTATGAGAGTTGCTGTTGGTATTCATGGTGATGATATACAAA 332924 Query 363509 CCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCA 363564 || |||||||| ||||| || ||||| | | | || | || || | ||| Sbjct 332925 GTGCTATTGAAACCTATAATCTAATGTCTAAAAGATACTTTA----CCCATGCTTCTCCA 332980 Query 363565 ACAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAA 363620 || ||| |||||||| || | | |||| | ||||||||||| |||||| | Sbjct 332981 ACTTTGTTTAATGCTGGTACCCCAAGAAATCAA---ATGTCTTCTTG-TTTCTTAGTTGC 333036 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA-ATTGTGCTCTTATTT 363679 ||| | || ||||| || || ||||| | ||| || ||||| | | |||||||| |||| Sbjct 333037 TATGCAAGATGATTCTATTGAAGGTATTTATGATAC-CTTAAAACAATGTGCTCTGATTT 333095 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG---TT 363736 |||||| ||| || || |||||| || || |||||| || | | || | | || Sbjct 333096 CCAAGACTGCTGGTGGTATTGGTTTACACATTCACAATATTAG---ATCGACCGGTTCTT 333152 Query 363737 ACATTCGCGGCA-CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 | ||| || | || || | | || || || | |||| ||| || | |||||| || Sbjct 333153 ATATTGCAGGTACCAACGGTACA-TCCAACGGTATCATTCCAATGGTTAGAGTGTTTAAC 333211 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGT 363853 ||||| || || || ||||| || ||||| | |||| | || || |||||| | | Sbjct 333212 AATACCGCTAGATATGTCGATCAAGGTGGTAACAAAAGACC--TGGTGCCTTTGCTTTAT 333269 Query 363854 ATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAA 363913 |||||||||| || || |||||||| || ||| |||| | | |||||| || | Sbjct 333270 ATCTCGAGCCATGGCACGCAGATATTTTAGACTTTATTGACATTAGAAAAAACCATGGTA 333329 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 | || ||| | | ||| | ||| ||||| |||| | ||| ||||||| || |||| Sbjct 333330 AGGAAGAAATCAGAGCAAGAGATTTGTTCCCTGCATTATGGATTTCTGATTTATTCATGA 333389 Query 363974 AGCGCG-TGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTT 364032 || | | || | || ||||| ||| | || |||| ||| ||| |||||| | Sbjct 333390 AGAGAGTTGAAAACAATCAAGAA-TGGACTCTTTTTTCACCAAGTGAAGCCCCAGGTTTG 333448 Query 364033 TCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAG 364092 ||||| | ||||| || | | | |||||||||| |||||| || || | Sbjct 333449 AGTGATGTTTATGGTGATGAATTCGAAGAATTATACGAAAAATATGAAAAAGAAGGTAGA 333508 Query 364093 GCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 | | | || || || || || |||||| | || |||| | |||| || Sbjct 333509 GGTAGATCCACCATCAAGGCTCAAAAATTATGGTACTCTATTTTGGAAGCACAGACAGAA 333568 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCAC 364212 || || ||||| | ||| | || || ||| | |||||| | || |||||||| ||| || Sbjct 333569 ACCGGTACACCATTCATGCTTTATAAGGATGCATGCAACAGGAAATCCAACCAACAGAAC 333628 Query 364213 CTTGGTA----CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268 | |||| ||| || | || || ||| |||||| |||||||| | | || Sbjct 333629 TTGGGTATGATCAAATCTTC----TAATCTGTGTTGTGAGATTGTTGAATACTCTTCCCC 333684 Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || || ||| || |||||| | || || | || | || || ||||| Sbjct 333685 AGAAGAAGTTGCTGTTTGTAACTTAGCATCAGTTGCATTACCAGCATTTGT 333735 >seq5 Length=831479 Score = 149 bits (164), Expect = 2e-30 Identities = 479/739 (65%), Gaps = 12/739 (2%) Strand=Plus/Plus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 || || |||||| | |||| ||||| || || ||| | || || || | || Sbjct 304565 GCCTTTTTTGCTGCTTCAGATGGTATTGTCAACGAAAATTTGGTTGAAAACTTCTCGGCT 304624 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 || | ||| ||| || |||| |||||||||||| | ||||| ||||| ||||| | Sbjct 304625 GAGGTGCAAATCCCTGAAGCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATC 304684 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398 || |||||||||| || | || | | | || | ||| | | ||| || Sbjct 304685 CATTCGGAAACATACTCCTTATTGATTGACACCTATGTCAAGGATCCAAAGGAAT--CGG 304742 Query 22399 AA--CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGC 22456 || ||||||| || ||| | ||||| || ||||| | ||||| || ||||| Sbjct 304743 AATTCTTATTCAATGCCATTGAAAACATTCCATGTATTAAAGAAAAGGCCGACTGGGCCA 304802 Query 22457 TGAAATGGATGAACAATGAACGTTCATT---CGCGGAACGTCTTATTGCATTTGCTGTGG 22513 ||| ||||||| | ||||| | |||| || ||| | | |||| ||||| | | Sbjct 304803 TGAGATGGATGTGCGATGAAAATGCATTATTCGGTGAAAGATTAGTTGCCTTTGCCGCTG 304862 Query 22514 TTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAA 22573 ||||||| || || || || ||| | ||| | | || || ||| | |||||| | | Sbjct 304863 TTGAAGGTATCTTTTTCTCCGGATCGTTTGCTTCCATTTTCTGGTTGAAAAAAAGAGGTT 304922 Query 22574 TTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCG 22633 | ||||| ||| | || ||||| || || |||||| || ||||||| ||| | || |||| Sbjct 304923 TGATGCCAGGTTTGACATTTTCCAACGAATTAATTTGCAGAGATGAAGGTTTACACACCG 304982 Query 22634 ATTTTGCGTGTATGCTA-TATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTA 22692 ||||||| ||| | || | || | | | || | | ||||| | | || Sbjct 304983 ATTTTGCTTGTTTATTATTCTCCCATTTGAACAATACCCCAGATTCCA----AGATCGTG 305038 Query 22693 CTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTACCA 22752 || | || || | | || |||||| |||||| || | | || || | ||| Sbjct 305039 CTCAAGATCATCGAAGAAGCTGTTGAAATTGAACAAAGATATTTCACAGACGCTCTTCCA 305098 Query 22753 GTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGAT 22812 | | | ||||||| || || | ||| || |||| | |||||||||| || Sbjct 305099 GCCAACTTACTTGGTATGAACAAAGATTTGATGTGTCAATATGTCGAATTTGTTGCCGAC 305158 Query 22813 CGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATGG 22872 | || | |||| || |||| || ||| || |||||| ||||| ||||| | Sbjct 305159 AGACTTCTTGTTTCTCTTGGTTGTGACAAGAGATACAACGTCACAAATCCTTTTGATTTC 305218 Query 22873 ATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATAC 22932 |||||| || || | | || |||||||| ||||| ||||| ||||| || ||| Sbjct 305219 ATGGAAAACATCTCTTTAGCTGGTAAGACCAACTTCTTTGAAAAGAGAGTCTCCGATTAC 305278 Query 22933 CAAAAAGCAGGTGTTATGG 22951 ||||| || ||||| |||| Sbjct 305279 CAAAAGGCCGGTGTCATGG 305297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352982128934