Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq5 104 2e-17 seq2 104 2e-17 seq6 86.0 5e-12 >seq5 Length=831479 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||||||||| || | || || || ||||| || | ||| || || Sbjct 265442 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 265501 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 || || || ||||| || || ||||| || ||||| ||||| |||| ||| Sbjct 265502 TCTGATACCATT-GACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGA 265560 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | || || || ||||||||||| | | |||| | |||| || Sbjct 265561 CCAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTA 265620 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || || ||| | || ||||||||||||| |||| || Sbjct 265621 CAACATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGG 265671 >seq2 Length=1335671 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| || ||||| || || || || ||||||||| | ||| || || Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895 Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 |||||| || ||||| || || ||||| || || || ||||| | || ||| Sbjct 4896 TCCGACACCATT-GACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4954 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 || |||||| | || | ||| || || ||||| ||||| | | |||| | | || || Sbjct 4955 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTA 5014 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| || || || | || | || ||||||||| |||| || Sbjct 5015 CAACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065 >seq6 Length=817167 Score = 86.0 bits (94), Expect = 5e-12 Identities = 120/167 (72%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 115356 GACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTT 115414 ||||| || ||||| || ||| || || ||||| | || ||| || || ||| | Sbjct 642970 GACAACGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTG 643029 Query 115415 ATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAA 115474 || | |||||| || |||||||| || | | ||| | | || || |||||||||||| Sbjct 643030 ATCTTTGCGGGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAA 643089 Query 115475 GAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG---AAAACC 115518 || || || | ||| |||||||||||||| |||| || |||||| Sbjct 643090 GAATCCACACTCCATTTGGTGTTGAGATTGAGAGGTGGTACAAAACC 643136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343808196440