Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq5 104 2e-17
seq2 104 2e-17
seq6 86.0 5e-12
>seq5
Length=831479
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||||||||| || | || || || ||||| || | ||| || ||
Sbjct 265442 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 265501
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|| || || ||||| || || ||||| || ||||| ||||| |||| |||
Sbjct 265502 TCTGATACCATT-GACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGA 265560
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | || || || ||||||||||| | | |||| | |||| ||
Sbjct 265561 CCAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTA 265620
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| || || ||| | || ||||||||||||| |||| ||
Sbjct 265621 CAACATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGG 265671
>seq2
Length=1335671
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||||||||| || ||||| || || || || ||||||||| | ||| || ||
Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|||||| || ||||| || || ||||| || || || ||||| | || |||
Sbjct 4896 TCCGACACCATT-GACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4954
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | ||| || || ||||| ||||| | | |||| | | || ||
Sbjct 4955 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTA 5014
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| || || || | || | || ||||||||| |||| ||
Sbjct 5015 CAACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065
>seq6
Length=817167
Score = 86.0 bits (94), Expect = 5e-12
Identities = 120/167 (72%), Gaps = 4/167 (2%)
Strand=Plus/Plus
Query 115356 GACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTT 115414
||||| || ||||| || ||| || || ||||| | || ||| || || ||| |
Sbjct 642970 GACAACGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTG 643029
Query 115415 ATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAA 115474
|| | |||||| || |||||||| || | | ||| | | || || ||||||||||||
Sbjct 643030 ATCTTTGCGGGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAA 643089
Query 115475 GAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG---AAAACC 115518
|| || || | ||| |||||||||||||| |||| || ||||||
Sbjct 643090 GAATCCACACTCCATTTGGTGTTGAGATTGAGAGGTGGTACAAAACC 643136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343808196440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |