Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4 452 5e-122
seq5 239 6e-58
>seq4
Length=942658
Score = 452 bits (500), Expect = 5e-122
Identities = 1380/2127 (65%), Gaps = 29/2127 (1%)
Strand=Plus/Minus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
||||||||||||| ||||| || | || || | | || ||||| || || || |
Sbjct 334632 GTGAATTGAATGGCAGCGGCAGCAGCTTGAGTTCTCAAGTAATACATACCAGTCTTCAAT 334573
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTAT 61968
|| ||||||| || |||||||| || ||||| || || ||| ||
Sbjct 334572 CCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTACCCATGGTAGGGTTCTT-TAG 334514
Query 61969 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62028
|| || |||||| |||| |||||| ||| |||| || ||||| |||||||| | ||
Sbjct 334513 GTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGAT 334454
Query 62029 AATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62088
||| | |||||| | |||||||||| || || || | ||| || |||| |||||
Sbjct 334453 AATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAAT 334394
Query 62089 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62145
||| | || ||||| || || || | ||||| ||||| || ||| ||
Sbjct 334393 GTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGAATCGTT 334334
Query 62146 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62205
||||||| | || || |||| | | | || ||||| | || || || ||
Sbjct 334333 CCATAATCCCATATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACC 334274
Query 62206 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 62265
| || ||||| | | ||||||||| ||| || ||||| | | | ||||| | ||
Sbjct 334273 GGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACC 334214
Query 62266 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62325
||||||||||| ||| || ||||| ||||| ||||| || |||||| ||||| | |||
Sbjct 334213 CAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACC 334154
Query 62326 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAACN 62383
| | || || || |||| ||||||| ||| | || | || | ||
Sbjct 334153 AAACTTGGAAATCTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACC 334094
Query 62384 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 62443
||||| | ||| | ||| || || ||| | || || || |||
Sbjct 334093 CCACAAATCAAA--TTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATAT 334036
Query 62444 GGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCG 62503
|| || || | || || ||| ||| || || |||| | ||| || || |||||
Sbjct 334035 GGACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCA 333976
Query 62504 AAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCT--ATCAAATGGATAATTTAAGAGAA 62561
|| || | | ||||| ||| || | ||| ||||||||| | |||| | |
Sbjct 333975 AAAATTTGTATGTTTAGTTCTCTAGCCTG--GGCAGAATCAAATGGCAATCTTAACATCA 333918
Query 62562 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62621
| || || || ||||| |||||||| |||| | | || ||||| | |||| | || ||
Sbjct 333917 TGAAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATC 333858
Query 62622 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAA 62681
|| ||||||| || |||||||| || | || || || ||||| | ||| || |||
Sbjct 333857 TTCTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAA 333798
Query 62682 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCC---------CATCTATTA 62732
|||||| | || | | ||| ||| | | | | | |||| ||
Sbjct 333797 CAACTTTGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTTT 333738
Query 62733 CAA-ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCG 62789
||| | ||| | |||||||| ||||| | |||||||| || || || | | |
Sbjct 333737 CAACAAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAAG 333678
Query 62790 CATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGAT 62849
|||| | |||||| || |||||| | | ||||| | || || || ||||| |
Sbjct 333677 AGTATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGT 333618
Query 62850 TACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG 62909
| || |||| || |||||||||||||| |||||||| ||||| ||||| |||| |
Sbjct 333617 TGGATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTG 333558
Query 62910 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 62969
||| | ||| | | ||| | | ||||||| || | ||| | ||| ||||
Sbjct 333557 CTTCCAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGATCTACCTCTACCTTCTT 333498
Query 62970 TTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGAC 63029
|||| ||| | || ||| |||||| || || || |||||| || || ||
Sbjct 333497 TTTCATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTGGGG 333438
Query 63030 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63089
|||| || | | | | ||| ||| | | | |||| ||||| || | ||
Sbjct 333437 CTTCACTTGGTGAAAAAAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAAT 333378
Query 63090 CAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63149
||| |||||| | || || | |||||| | ||| ||| || || || || |
Sbjct 333377 CAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGATTTCTTCCTTACCATGGTTTT 333318
Query 63150 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63209
|| ||| || | || | | |||||| | ||||| || || | |||| || |
Sbjct 333317 TTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAAAGG 333258
Query 63210 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63269
| ||||| | |||||| || || ||||| | ||||||||||| || ||| | ||||| |
Sbjct 333257 CACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTCTAA 333198
Query 63270 ACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCAC 63329
||||||||| ||||| ||||||||||| ||||| |||| ||||| || | | |
Sbjct 333197 CCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCGATC 333138
Query 63330 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63389
|||||| ||| || ||| || || || || | || || || | || ||| |||
Sbjct 333137 TAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATTGTT 333078
Query 63390 TTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAG 63449
|||| |||||||| || || || ||| |||||| ||| || || ||||| ||
Sbjct 333077 TTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAGAAG 333018
Query 63450 ACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATT 63509
||||||| | | || || |||||||| || || |||||||| || ||||| ||
Sbjct 333017 ACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGTATC 332958
Query 63510 TTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTA 63569
||| ||| | |||||| || || |||||||| | |||||| |||||| || |
Sbjct 332957 TTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATACCAA 332898
Query 63570 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACA 63629
| || || | ||| | || |||||||||||||| | || | || | | ||||||
Sbjct 332897 CAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCAACA 332838
Query 63630 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 63687
| || ||| ||||||| ||||| ||||||||||||||||| ||||| |||| || ||
Sbjct 332837 AATAAGATCTTTCCAACGTTTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCATA 332780
Query 63688 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGA 63747
| |||| | || || ||| || ||| | || | ||| ||| | ||
Sbjct 332779 ATGAATAGCGTCGTCAAGAACATCAGCATTTTTTTGGACAATTTCCCAGGTGTCATCGGA 332720
Query 63748 AATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCAC 63807
||| || ||| | ||||| || || || |||| |||||| ||| | || | || | |||
Sbjct 332719 AATCATTGGAGAGTGTTTACCGTTCTTTGGATCGACATATTTGTACAATTGGTCAACCAC 332660
Query 63808 TTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAG 63867
||| ||| |||| | |||| ||| || | || || | || | ||| || || |
Sbjct 332659 TTCGGAGAATTTTTTTGTGGTTTGTTTTTGCAAGTTAGAAATCGCCACTCTTGCTGCCAA 332600
Query 63868 AATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTC 63927
|| || ||||| ||||| || || | ||||| |||| ||||| | | ||
Sbjct 332599 AACTGCGTAATCTGGATGGATGGTGGTCATATATGCTGCAGTTTCTGCTGCTAAGTTATC 332540
Query 63928 CAATTCTACCGTTGTTACACCATTATa 63954
||| || ||||| | ||||||| |||
Sbjct 332539 CAACTCCACCGTGGAAACACCATCATA 332513
>seq5
Length=831479
Score = 239 bits (264), Expect = 6e-58
Identities = 600/895 (67%), Gaps = 34/895 (4%)
Strand=Plus/Minus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
|||||||| || || | ||||| || || || || ||||| |||| || || |||
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489
||||||||||| || ||||| || || || || | || | | | || | ||||| |
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAG---AGAAA-C 305168
Query 32490 AA----TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA- 32544
|| ||| || || |||||||| | |||| ||||| || ||||| || |
Sbjct 305167 AAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAG 305108
Query 32545 TAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTA 32604
|||||| |||||||||| | || | | || ||||||||| || || ||| |
Sbjct 305107 TAAGTTGG-CTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGA 305049
Query 32605 TAATAGATCTTA--CTGTTTCTTC-ACTCGGTGG-ATACAATAAATGTTTAAACATCAAA 32660
| |||||| | |||| | || | || || ||||| || | |||
Sbjct 305048 T----GATCTTGAGCACGATCTTGGAATCTGGGGTATTGTTCAAATGGGAGAATAATAAA 304993
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| || |||||| ||||| ||| || ||||| | |||||||||||||||||| || |
Sbjct 304992 CAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAA 304933
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|| ||||| | || | ||||| | ||| || ||||| ||||| ||||| || || ||
Sbjct 304932 CCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAG 304873
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCGGCGCTGTCAT--- 32835
|| ||||| || || |||||||||| | ||| || || |||| || | ||||
Sbjct 304872 ATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAA--TGCATTTTCATCGC 304815
Query 32836 GTATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCA 32894
||||| || || ||||| |||||||| | ||| | ||| || || | || || |||
Sbjct 304814 ACATCCATCTCATG-GCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCA 304756
Query 32895 TTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAAGACTAT 32952
|| || | | | ||| || ||| || ||||| || ||||||| || || |||
Sbjct 304755 TTGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTAT 304696
Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012
|||||||||| |||||||| || ||||| || || ||||| || | || || |
Sbjct 304695 --GTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAG 304638
Query 33013 TAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 33072
|| || || || | | || ||| | |||||||| || || || || || |
Sbjct 304637 GGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAG 304578
Query 33073 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTAT 33129
| |||||||| ||||| || | || ||| || |||||| ||||| || |
Sbjct 304577 CAGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGT 304518
Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189
|||| || | | || ||||| | || | |||||| | ||||| || || || || |
Sbjct 304517 TCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGG 304458
Query 33190 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244
||||||| ||||| | |||||| ||||| |||| ||||| || | ||||||||
Sbjct 304457 CCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631706945200
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