Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 132 4e-26
seq2 122 8e-23
seq6 104 2e-17
>seq5
Length=831479
Score = 132 bits (146), Expect = 4e-26
Identities = 171/235 (73%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| || || ||||| ||||||| | ||||| || || |||
Sbjct 265445 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 265504
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || || || | |||||||| ||| || || ||||| || ||||||||||||
Sbjct 265505 GATACCATTGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAA 265564
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | | || || || || || ||||||||||| | | | || | ||| |||||
Sbjct 265565 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTACAAC 265624
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATT 25233
|| ||||| |||||||| || || || ||| | || ||||||| || ||||||
Sbjct 265625 ATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGG-TATTATT 265678
>seq2
Length=1335671
Score = 122 bits (134), Expect = 8e-23
Identities = 166/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || || || | |||||||| |||| || | ||||| || || ||
Sbjct 4838 AATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCTTC 4897
Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| || || || || |||||||| ||| ||||| ||||| ||||||||||||
Sbjct 4898 CGACACCATTGA--CAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || ||||| || || ||||| ||||| | | | || | || |||
Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| || ||||| |||||||| || || ||||| | || | ||||| ||
Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065
>seq6
Length=817167
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || |||||| | ||||| | || |||||||||||
Sbjct 642374 ATGCAGATCTTTGTCAAGACACTTACGGGTAAAACTATCACCCTAGAGGTGGAGTCGTCA 642433
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || |||| || || || ||||| ||||| |||||||||||||||
Sbjct 642434 GACACCATTGACAATGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAA 642493
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA 25153
||| | | || ||||| || ||||| || |||||
Sbjct 642494 CAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGA 642528
Score = 95.1 bits (104), Expect = 1e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||| ||||| |||||||||||||||||| | | || ||||| || || ||||||||
Sbjct 642994 GACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTTGCGGGTAAGCAATTAGAG 643053
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|| | | || | || ||||| ||||||||||||||||| || ||||| ||| |
Sbjct 643054 GACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCCACACTCCATTTGGTGTTG 643113
Query 25212 AGGCTAAGAGGAGG 25225
|| | ||||| ||
Sbjct 643114 AGATTGAGAGGTGG 643127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327804596155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |