Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq5 239 5e-58
>seq5
Length=831479
Score = 239 bits (264), Expect = 5e-58
Identities = 604/899 (67%), Gaps = 21/899 (2%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || ||| | ||||||||||| || ||||| || |
Sbjct 305296 CATGACACCGGCCTTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 305237
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGA 92906
||||| || | ||| | | | ||||| || |||| || ||| |||| |
Sbjct 305236 TAAAGAGAT-GTTTTCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACA-A 305179
Query 92907 TCAACTCGTACAATAA-TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAA 92965
||| |||| || ||| || || |||||||| | || ||| ||||||||||
Sbjct 305178 CCAAGAGAAACAAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTG 305119
Query 92966 TTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCT-CGATTACAA 93023
||||| || || ||| | | || |||||||| || || | |||||| | | ||| |||
Sbjct 305118 TTCATACCAAGTAAGTTGG-CTGGAAGAGCGTCTGTGAA-ATATCTTTGTTCAATTTCAA 305061
Query 93024 CGGCTTCTTTCAAGATTTCTATTAC--TCTACTATTTGGTGGTTTTTGTACGACATAATT 93081
| ||||||| | ||| | | || ||| | | | ||| || || | | ||
Sbjct 305060 CAGCTTCTTCGATGATCTTGAGCACGATCTTGGAATCTGGGGTATT-GTTCAA-ATGGGA 305003
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
| | | ||| || ||||| ||||| ||||||||||| |||| | || || || |||
Sbjct 305002 GAATAATAAACAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGA 304943
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||||| |||||||| | || |||| ||| || | ||| || || |||||||| ||
Sbjct 304942 AAATGTCAAACCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCC 304883
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
|| ||||| |||||||| || || ||||| || || | | ||| | || |||
Sbjct 304882 GGAGAAAAAGATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATT 304823
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | || |||||| | | ||||| ||||| |||| |||||||| || | ||||
Sbjct 304822 TTCATCGCACATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTC 304763
Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381
|| || || |||| | | || || | | ||| | || || || || || |
Sbjct 304762 AATGGCATTGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAA 304703
Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441
|| || |||| ||||||| || ||||| |||||||| || |||||||| | ||
Sbjct 304702 GGAGTATGTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGC 304643
Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501
||| | ||| ||||| || || || | || || | |||||| ||||| ||||||||
Sbjct 304642 TTCAGGGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATC 304583
Query 93502 GGATGCTGCaaaaaaaGCCAATA-TATGCT-TTATAAAATGTTTC-TCATCATCTTTAAG 93558
|| || |||||||| ||||| | | || | | ||||| |||| | |||| ||||
Sbjct 304582 TGAAGCAGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCA--TTTAGT 304525
Query 93559 C--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616
| || | ||| ||| || || || || | || | ||||||| | ||||| || ||
Sbjct 304524 CTGTTGTTCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGAC 304465
Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
||||| || ||||||||||| | ||| || || || |||| ||||| || | |||||
Sbjct 304464 GCTTCGGCCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAA 304406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860542451880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |