Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 239 5e-58 >seq5 Length=831479 Score = 239 bits (264), Expect = 5e-58 Identities = 604/899 (67%), Gaps = 21/899 (2%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||| |||||||| || ||| | ||||||||||| || ||||| || | Sbjct 305296 CATGACACCGGCCTTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGC 305237 Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATACTTTTCACCGA 92906 ||||| || | ||| | | | ||||| || |||| || ||| |||| | Sbjct 305236 TAAAGAGAT-GTTTTCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACA-A 305179 Query 92907 TCAACTCGTACAATAA-TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAA 92965 ||| |||| || ||| || || |||||||| | || ||| |||||||||| Sbjct 305178 CCAAGAGAAACAAGAAGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTG 305119 Query 92966 TTCATTCCTAG-AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCT-CGATTACAA 93023 ||||| || || ||| | | || |||||||| || || | |||||| | | ||| ||| Sbjct 305118 TTCATACCAAGTAAGTTGG-CTGGAAGAGCGTCTGTGAA-ATATCTTTGTTCAATTTCAA 305061 Query 93024 CGGCTTCTTTCAAGATTTCTATTAC--TCTACTATTTGGTGGTTTTTGTACGACATAATT 93081 | ||||||| | ||| | | || ||| | | | ||| || || | | || Sbjct 305060 CAGCTTCTTCGATGATCTTGAGCACGATCTTGGAATCTGGGGTATT-GTTCAA-ATGGGA 305003 Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 | | | ||| || ||||| ||||| ||||||||||| |||| | || || || ||| Sbjct 305002 GAATAATAAACAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGA 304943 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||||| |||||||| | || |||| ||| || | ||| || || |||||||| || Sbjct 304942 AAATGTCAAACCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCC 304883 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || ||||| |||||||| || || ||||| || || | | ||| | || ||| Sbjct 304882 GGAGAAAAAGATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCATT 304823 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 | | || |||||| | | ||||| ||||| |||| |||||||| || | |||| Sbjct 304822 TTCATCGCACATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTC 304763 Query 93322 GATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAG 93381 || || || |||| | | || || | | ||| | || || || || || | Sbjct 304762 AATGGCATTGAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAA 304703 Query 93382 AGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGC 93441 || || |||| ||||||| || ||||| |||||||| || |||||||| | || Sbjct 304702 GGAGTATGTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGC 304643 Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 ||| | ||| ||||| || || || | || || | |||||| ||||| |||||||| Sbjct 304642 TTCAGGGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATC 304583 Query 93502 GGATGCTGCaaaaaaaGCCAATA-TATGCT-TTATAAAATGTTTC-TCATCATCTTTAAG 93558 || || |||||||| ||||| | | || | | ||||| |||| | |||| |||| Sbjct 304582 TGAAGCAGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCA--TTTAGT 304525 Query 93559 C--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 | || | ||| ||| || || || || | || | ||||||| | ||||| || || Sbjct 304524 CTGTTGTTCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGAC 304465 Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||| || ||||||||||| | ||| || || || |||| ||||| || | ||||| Sbjct 304464 GCTTCGGCCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAA 304406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860542451880