Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2 165 7e-36
seq5 149 5e-31
seq6 113 4e-20
>seq2
Length=1335671
Score = 165 bits (182), Expect = 7e-36
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| |||||||| | |||||||| || | || |||||||| ||| |
Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| || |||| ||||| || ||||||||||| ||||||||||| ||
Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || || | ||| | || || |||
Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| ||||||||| | || ||||| ||| ||||| | || |||
Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGGT 5066
>seq5
Length=831479
Score = 149 bits (164), Expect = 5e-31
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| ||||||||||||||||| || || ||||| ||||| || ||||| | ||||| |||
Sbjct 265439 GTCAAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAA 265498
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| | |||||| | ||| | |||| ||||| || ||||| ||||| ||||| |||||
Sbjct 265499 TCTTCTGATACCATTGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCT 265558
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| |||||| | | || || || || || || ||||| || | ||| | |||||
Sbjct 265559 GACCAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGAC 265618
Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||||| ||||| |||||||| | || || || ||| |||| | || ||| ||
Sbjct 265619 TACAACATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGGTATT 265675
>seq6
Length=817167
Score = 113 bits (124), Expect = 4e-20
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356
||||| || ||||| |||||||| ||||||||||| || ||||| | | || |||||
Sbjct 642979 AAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTTGCG 643038
Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
|| || || |||||||| | || | || || |||||||||||||||||||||||
Sbjct 643039 GGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCCACA 643098
Query 22417 ATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| ||||| || ||| ||||| | || |||
Sbjct 643099 CTCCATTTGGTGTTGAGATTGAGAGGTGGT 643128
Score = 100 bits (110), Expect = 2e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || |||||||| |||| || || ||||| | |
Sbjct 642374 ATGCAGATCTTTGTCAAGACACTTACGGGTAAAACTATCACCCTAGAGGTGGAGTCGTCA 642433
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | ||||| || ||||| |||||||| ||||||||||| || |||
Sbjct 642434 GACACCATTGACAATGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAA 642493
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373
|| | | || ||||| || |||||||| || ||
Sbjct 642494 CAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGA 642528
Score = 86.0 bits (94), Expect = 5e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| ||||| ||||| || | || || || || |||| ||||| |||||| |
Sbjct 641642 AGATGCAGATTTTCGTTAAGACACTTACAGGCAAGACCATCACCCTTGAGGTGGAATCTT 641701
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || ||| | ||| | | ||||| || || || |||||||| ||||||||||| || |
Sbjct 641702 CGGACACCATTGACAACGTGAAACAGAAGATCCAGGACAAGGAAGGTATTCCACCTGACC 641761
Query 22337 AACAACGTCTTATATTTGCCGG 22358
|||| | | || ||||| ||
Sbjct 641762 AACAGAGATTGATCTTTGCGGG 641783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727810728905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |