Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5 181 2e-40
seq2 170 4e-37
seq6 127 4e-24
>seq5
Length=831479
Score = 181 bits (200), Expect = 2e-40
Identities = 168/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| || ||||||||||| || ||||| | || || || ||
Sbjct 265657 CAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACCGTC 265598
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| || ||||| || | |||||||||||| ||||| || |||||||| ||
Sbjct 265597 TTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATC 265538
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| |||||| ||||||| || ||||| || | ||||| ||||| || ||||||||
Sbjct 265537 TTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGT 265478
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||| || || |||||
Sbjct 265477 CTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 265445
>seq2
Length=1335671
Score = 170 bits (188), Expect = 4e-37
Identities = 166/214 (78%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || ||||| || ||||| || ||||||||||| || || || | || || || ||
Sbjct 5051 CAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTC 4992
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| |||||||| |||||||||||
Sbjct 4991 TTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 4932
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| |||||| |||||| || |||||||| | ||||| ||||| | ||| |||||
Sbjct 4931 TTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAATGGT 4872
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || ||||| || ||||| || ||||||
Sbjct 4871 CTTACCGGTAAGGGTTTTAACGAAAATTTGCATT 4838
>seq6
Length=817167
Score = 127 bits (140), Expect = 4e-24
Identities = 132/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
|| || || || || || ||||| ||||| || || || || || | ||| ||||||||
Sbjct 642546 TCTGATAGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCA 642487
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408
|||||||| ||||||||||| |||||||| || || || |||||||||| ||
Sbjct 642486 GGTGGAATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGAC 642427
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | |||||| ||||| ||||| || |||||||| || ||||||||
Sbjct 642426 TCCACCTCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374
Score = 120 bits (132), Expect = 6e-22
Identities = 103/129 (80%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || || ||||| |||||||| ||||| || || || || || || || ||
Sbjct 643113 CAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGAKAGCGTTCTTCCGTC 643054
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| ||||| || || || || | ||| |||||||| |||||||| |||||||||||
Sbjct 643053 CTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTC 642994
Query 68369 TTGAATCTT 68377
||||||||
Sbjct 642993 CTGAATCTT 642985
Score = 104 bits (114), Expect = 4e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || | ||| |||||||| |||||||| ||||||||||| || |||||
Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| ||| || |||||||| | ||||| || || | ||||||||| || || || ||
Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664
Query 68442 GTCTTGACGAATATCTGCAT 68461
||||| ||||| ||||||||
Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621973749640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |