Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq5 105 7e-18 seq2 87.8 2e-12 seq6 84.2 2e-11 >seq5 Length=831479 Score = 105 bits (116), Expect = 7e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||||||| | ||||||||| || | ||| |||||||| || ||||| || | Sbjct 265672 ACCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGA 265613 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || | |||| |||| |||||||||||||| || | || || ||||| | ||| Sbjct 265612 TAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 265553 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | ||||| || ||| ||||| |||| ||| | | | || || ||||| | Sbjct 265552 GATACCTTCCTTATCTTGGATCTTTTGCTTGA-CGTTGTCAATGGTATCAGAAGATTCAA 265494 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 | || | |||||||| || || |||| ||||| ||||| |||||||| || || Sbjct 265493 CTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTGAC 265439 >seq2 Length=1335671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | ||| || || || | ||| |||||||| || ||||| |||| Sbjct 5066 ACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 5007 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || | |||| || | ||||||||||| || || | || || ||||| | ||| Sbjct 5006 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4947 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | |||||||| ||| ||||| |||| | | | |||||| ||||| || Sbjct 4946 AATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGAC 4887 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || ||||| || || || || || || || || ||||||||||| Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTT 4836 >seq6 Length=817167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/150 (72%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | |||||||||||| | |||| || |||||||| ||||| || | Sbjct 643128 ACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGA 643069 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | |||| |||| |||||||| || || || | || ||| ||||| | ||| Sbjct 643068 KAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGG 643009 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTT 42130 | | ||||||||| || || ||||| Sbjct 643008 AATACCTTCCTTGTCCTGAATCTTCTGTTT 642979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212548764080