Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq5 105 7e-18
seq2 87.8 2e-12
seq6 84.2 2e-11
>seq5
Length=831479
Score = 105 bits (116), Expect = 7e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| |||||||| | ||||||||| || | ||| |||||||| || ||||| || |
Sbjct 265672 ACCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGA 265613
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
| || | |||| |||| |||||||||||||| || | || || ||||| | |||
Sbjct 265612 TAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGG 265553
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159
| | ||||| || ||| ||||| |||| ||| | | | || || ||||| |
Sbjct 265552 GATACCTTCCTTATCTTGGATCTTTTGCTTGA-CGTTGTCAATGGTATCAGAAGATTCAA 265494
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214
| || | |||||||| || || |||| ||||| ||||| |||||||| || ||
Sbjct 265493 CTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTGAC 265439
>seq2
Length=1335671
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | ||| || || || | ||| |||||||| || ||||| ||||
Sbjct 5066 ACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 5007
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
| || | |||| || | ||||||||||| || || | || || ||||| | |||
Sbjct 5006 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4947
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | |||||||| ||| ||||| |||| | | | |||||| ||||| ||
Sbjct 4946 AATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGAC 4887
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| | || ||||| || || || || || || || || |||||||||||
Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTT 4836
>seq6
Length=817167
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| ||||| || | |||||||||||| | |||| || |||||||| ||||| || |
Sbjct 643128 ACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGA 643069
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || | |||| |||| |||||||| || || || | || ||| ||||| | |||
Sbjct 643068 KAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGG 643009
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTT 42130
| | ||||||||| || || |||||
Sbjct 643008 AATACCTTCCTTGTCCTGAATCTTCTGTTT 642979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212548764080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |