Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 116 4e-21
seq5 102 8e-17
>seq2
Length=1335671
Score = 116 bits (128), Expect = 4e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| | |||| |||| || ||||| ||||| |||||||| || |
Sbjct 5066 ACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 5007
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | ||||| || ||| | || | | || ||||| || ||
Sbjct 5006 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4947
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| || |||||||| ||| || | || || | || ||
Sbjct 4946 AATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGAC 4887
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTA 64447
||| | || | |||||| ||||| | ||||| ||||||||||||||||||
Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTTA 4835
>seq5
Length=831479
Score = 102 bits (112), Expect = 8e-17
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | ||| | |||| || ||||| ||||| |||||||| || | | ||| |
Sbjct 265662 AATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTA 265603
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
||||||| | ||||| || || | || | | || ||||| || || || |||||
Sbjct 265602 CCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCC 265543
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| || |||||||| || || | |||||| | || ||||||| |||
Sbjct 265542 TTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACTTCTAAAGTG 265483
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| |||||| || || || || || || ||||||||||| ||
Sbjct 265482 ATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 265442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644568914280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |