Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
seq6 96.9 3e-15
>seq2
Length=1335671
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| ||||| || | | | || |||||||| |||||||||||
Sbjct 5065 CCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 5006
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | ||| || | ||| ||||| | | |||||| | |||||||| || ||
Sbjct 5005 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGA 4946
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| ||||| ||| ||||| || | |||| || | |||||||| || || ||
Sbjct 4945 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTCGGAAGATTCGAC 4887
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || ||||| || || ||||| || ||||| |||||
Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCAT 4839
>seq6
Length=817167
Score = 96.9 bits (106), Expect = 3e-15
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 138469 TGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATT 138528
|||||||| | | |||| | | ||||||||| || || |||||||| ||||| ||
Sbjct 642519 TGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGAATC 642460
Query 138529 TTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACC 138587
|| ||||| | ||||| | | |||||| | |||||||||||| | || | ||||||||
Sbjct 642459 TTCTGTTTCACATTGT-CAATGGTGTCTGACGACTCCACCTCTAGGGTGATAGTTTTACC 642401
Query 138588 AGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || || || ||||| ||||||||
Sbjct 642400 CGTAAGTGTCTTGACAAAGATCTGCAT 642374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262170478640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |