Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq6 96.9 3e-15 >seq2 Length=1335671 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| ||||| || | | | || |||||||| ||||||||||| Sbjct 5065 CCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 5006 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | ||| || | ||| ||||| | | |||||| | |||||||| || || Sbjct 5005 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGA 4946 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| ||||| || | |||| || | |||||||| || || || Sbjct 4945 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTCGGAAGATTCGAC 4887 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| || || ||||| || ||||| ||||| Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCAT 4839 >seq6 Length=817167 Score = 96.9 bits (106), Expect = 3e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 138469 TGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATT 138528 |||||||| | | |||| | | ||||||||| || || |||||||| ||||| || Sbjct 642519 TGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGAATC 642460 Query 138529 TTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACC 138587 || ||||| | ||||| | | |||||| | |||||||||||| | || | |||||||| Sbjct 642459 TTCTGTTTCACATTGT-CAATGGTGTCTGACGACTCCACCTCTAGGGTGATAGTTTTACC 642401 Query 138588 AGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || || ||||| |||||||| Sbjct 642400 CGTAAGTGTCTTGACAAAGATCTGCAT 642374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262170478640