Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 6e-23
seq5 114 3e-20
seq6 84.2 5e-11
seq4 84.2 5e-11
>seq2
Length=1335671
Score = 123 bits (136), Expect = 6e-23
Identities = 162/224 (72%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| || || || |||||||||| ||||||||||| || || || ||
Sbjct 5054 TCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACC 4995
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||||| ||||| || || ||||| | | || ||||| || ||| |||||
Sbjct 4994 GTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 4935
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||||||||| || || | |||||| | | ||| || || | || ||
Sbjct 4934 GTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCAAGGGTAAT 4875
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAG 199637
|||||||| || || ||||| || |||||||| ||||||||
Sbjct 4874 GGTCTTACCGGTAAGGGTTTTAACGAAAATTTG---CATTTTAG 4834
>seq5
Length=831479
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| ||||| || |||||||||| ||||||||| | || || || ||
Sbjct 265660 TCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAGGTTCTACC 265601
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||||| | ||||| || |||||||| | | || ||||| || || |||||
Sbjct 265600 GTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 265541
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||||||||| ||| || | ||| || | | ||| || || || |||||
Sbjct 265540 ATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACTTCTAAAGTGAT 265481
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | || || |||||||||||
Sbjct 265480 GGTCTTACCAGTTAAGGTCTTGACAAAAATTTG 265448
>seq6
Length=817167
Score = 84.2 bits (92), Expect = 5e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 199466 GTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATT 199525
|| ||||| ||||||| ||| || || || ||||| | | ||| ||||| || |||
Sbjct 642537 GTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGAATA 642478
Query 199526 CCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCC 199585
||||| ||||||||||| || ||||| || | |||||||| | || || ||
Sbjct 642477 CCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGACTCCACCTCT 642418
Query 199586 AACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
| ||||| || |||||||| || || || ||||| || ||
Sbjct 642417 AGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTG 642377
>seq4
Length=942658
Score = 84.2 bits (92), Expect = 5e-11
Identities = 175/258 (68%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
|| ||||| || | ||||| || |||| || | || || ||||||| || |
Sbjct 333600 GCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTAC 333541
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
|| | || ||| || || | ||| | ||| |||| ||||||||||| ||| | || ||
Sbjct 333540 CATAATTTTTGAGCCTTGATGGTGGATCTACCTCTACCTTCTTTTTCATATTTTTCGTAT 333481
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAA 167946
| |||||||| || | || |||| || |||| ||| || ||||| | || ||||
Sbjct 333480 AATTCTTCGAATTCATCACCATAAACATCACTCAA-ACCTGGGGCTTCACTTGGTGAAAA 333422
Query 167947 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 168006
||| |||| | | || | | || || ||||||||||| | || ||| |||| | ||
Sbjct 333421 AAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGC 333362
Query 168007 GTAGAACAATTGCCTTGC 168024
|||||| | |||||
Sbjct 333361 AGGGAACAAATCTCTTGC 333344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921041117479
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |