Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 4e-15 seq2 89.7 6e-13 >seq5 Length=831479 Score = 96.9 bits (106), Expect = 4e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||||||| | |||||||| || | || ||||||||||| |||||||||||| Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 265612 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || | |||| || | ||||| || ||||| ||||| | || ||||| | || Sbjct 265611 AAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGG 265552 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | ||||| || |||||| | ||||| ||| | | | || || ||||| || Sbjct 265551 ATACCTTCCTTATCTTGGATCTTTTGCTTGA-CGTTGTCAATGGTATCAGAAGATTCAAC 265493 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || | |||||||| || || || | || || ||||| |||||||| ||| Sbjct 265492 TTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTG 265441 >seq2 Length=1335671 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| |||| || | |||| || | ||||| || || || Sbjct 5029 TCCTTTTGGATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAG 4970 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || || | || ||||| | || | | |||||||| |||||| | ||||| | Sbjct 4969 ATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTG 4910 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||||| || || | || ||||| || || || || |||||||| Sbjct 4909 TCAATGGTGTCGGAAGATTCGACTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACG 4850 Query 46583 AAGATTTGCATTTT 46596 || ||||||||||| Sbjct 4849 AAAATTTGCATTTT 4836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238138577240