Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq5 145 8e-30 seq2 104 2e-17 >seq5 Length=831479 Score = 145 bits (160), Expect = 8e-30 Identities = 401/610 (66%), Gaps = 11/610 (2%) Strand=Plus/Minus Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 |||||| ||| | || |||||||| ||| || || || || || ||| |||| | Sbjct 305011 CAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAA 304952 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 ||||||| || ||||| || ||||| | || | |||||| | ||| || |||| || Sbjct 304951 TTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGC 304892 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 || || || || |||| || || || || || || || || | | || ||||| Sbjct 304891 AAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAA 304832 Query 133056 CGTGGCTTCTTTGCTGGCG-ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACG 133114 || | ||| | || ||||| | || ||||| |||||||||||||| | || | Sbjct 304831 TAATGCAT-TTTCATCGCACATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATG 304773 Query 133115 GCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGG 133171 | || |||| ||||| || || || || || | |||| | | | || |||| Sbjct 304772 GAATGTTTTCAATGGCATTGAATAA---GAATTCCGATTCCTTTGGATCCTTGACATAGG 304716 Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231 |||| || | || || ||||||| || | ||| ||||| |||||| || || | Sbjct 304715 TGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCAT 304656 Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291 | || ||| || || | ||||| || | ||| || |||| |||||||| Sbjct 304655 AGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGT 304596 Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351 |||| || || || || || |||||||||| ||| | |||||| | |||| Sbjct 304595 TGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGT 304536 Query 133352 TGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 | || || | | | ||||||| | |||||| |||| ||| | || ||| ||| Sbjct 304535 TATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGG 304476 Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAA 133468 |||| || ||||| ||||| ||||||||||| ||| || || |||| || || | Sbjct 304475 TCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGA 304416 Query 133469 AAATCACAAA 133478 | | |||||| Sbjct 304415 AGAGCACAAA 304406 >seq2 Length=1335671 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 ||||||||||| ||||| ||||| || || || || ||||| ||| | || ||||| | Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | | || |||| |||| ||||| || || ||||| | ||| Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| | | || | || || || || |||| |||| | ||| | |||||| Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || || || || || || | |||||||| || Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172568670080