Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 8e-30
seq2 104 2e-17
>seq5
Length=831479
Score = 145 bits (160), Expect = 8e-30
Identities = 401/610 (66%), Gaps = 11/610 (2%)
Strand=Plus/Minus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| ||| | || |||||||| ||| || || || || || ||| |||| |
Sbjct 305011 CAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAA 304952
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
||||||| || ||||| || ||||| | || | |||||| | ||| || |||| ||
Sbjct 304951 TTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGC 304892
Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055
|| || || || |||| || || || || || || || || | | || |||||
Sbjct 304891 AAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAA 304832
Query 133056 CGTGGCTTCTTTGCTGGCG-ATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACG 133114
|| | ||| | || ||||| | || ||||| |||||||||||||| | || |
Sbjct 304831 TAATGCAT-TTTCATCGCACATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATG 304773
Query 133115 GCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGG 133171
| || |||| ||||| || || || || || | |||| | | | || ||||
Sbjct 304772 GAATGTTTTCAATGGCATTGAATAA---GAATTCCGATTCCTTTGGATCCTTGACATAGG 304716
Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231
|||| || | || || ||||||| || | ||| ||||| |||||| || || |
Sbjct 304715 TGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTCCATCATGATTTGGAAACCAT 304656
Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291
| || ||| || || | ||||| || | ||| || |||| ||||||||
Sbjct 304655 AGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGT 304596
Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351
|||| || || || || || |||||||||| ||| | |||||| | ||||
Sbjct 304595 TGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGT 304536
Query 133352 TGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408
| || || | | | ||||||| | |||||| |||| ||| | || ||| |||
Sbjct 304535 TATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGG 304476
Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAA 133468
|||| || ||||| ||||| ||||||||||| ||| || || |||| || || |
Sbjct 304475 TCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGA 304416
Query 133469 AAATCACAAA 133478
| | ||||||
Sbjct 304415 AGAGCACAAA 304406
>seq2
Length=1335671
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
||||||||||| ||||| ||||| || || || || ||||| ||| | || ||||| |
Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | | | || |||| |||| ||||| || || ||||| | |||
Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| | | || | || || || || |||| |||| | ||| | ||||||
Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||||||| | || || || || || || | |||||||| ||
Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172568670080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |