Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 250 3e-61 >seq4 Length=942658 Score = 250 bits (276), Expect = 3e-61 Identities = 1041/1633 (64%), Gaps = 41/1633 (3%) Strand=Plus/Plus Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779 ||||| | || || |||||||| |||||| |||||||| ||||||| | |||| Sbjct 332978 CCAACTTTGTTTAATGCTGGTACCCCAAGAAATCAAATGTCTTCTTGTTTCTTAGTTGCT 333037 Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839 | | || ||||| || | || ||||| | || | | ||||||| | || || Sbjct 333038 ATGCAAGATGATTCTATTGAAGGTATTTATGATACCTTAAAACAATGTGCTCTGATTTCC 333097 Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATT 111899 ||| ||||||||||| || | ||||| || || | ||| | | | ||| |||| Sbjct 333098 AAGACTGCTGGTGGTATTGGTTTACACATTCACAATATTAGATCGACCGGTTCTTATATT 333157 Query 111900 AGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 111959 |||||| || ||| ||| | ||||| ||||||||| || | || |||||| || Sbjct 333158 GCAGGTACCAACGGTACATCCAACGGTATCATTCCAATGGTTAGAGTGTTTAACAATACC 333217 Query 111960 GCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTT 112013 || | ||||| | |||| ||| | ||| || || | || | ||||| Sbjct 333218 GCTAGATATGTCGATCAAGGTGG---TAACAAAAGACCTGGTGCCTTTGCTTTATATCTC 333274 Query 112014 GAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAG 112073 |||||||||||||| ||||| | || || |||| | | ||||| ||| | || Sbjct 333275 GAGCCATGGCACGCAGATATTTTAGACTTTATTGACATTAGAAAAAACCATGGTAAGGAA 333334 Query 112074 GAGGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAG 112132 || | | || | ||| | ||| | || | |||||| | ||| | ||||||||||| Sbjct 333335 GAAAT-CAGAGCAAGAGATTTGTTCCCTGCATTATGGATTTCTGATTTATTCATGAAGAG 333393 Query 112133 AGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA 112192 |||||| | | | | ||| |||| |||| ||| | || || ||| | || Sbjct 333394 AGTTGAAAACAATCAAGAATGGACTCTTTTTTCACCAAGTGAAGCCCCAGGTTTGAGTGA 333453 Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252 || ||||| || || |||| | ||| ||| || || ||||| || | | | Sbjct 333454 TGTTTATGGTGATGAATTCGAAGAATTATACGAAAAATATGAAAAAGAAGGTAGAGGTAG 333513 Query 112253 TGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312 | || | ||| | | ||| | ||||| | | | || || || || || Sbjct 333514 ATCCACCATCAAGGCTCAAAAATTATGGTACTCTATTTTGGAAGCACAGACAGAAACCGG 333573 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 |||||||| |||||||| || || || || ||| || || ||| |||| ||||| Sbjct 333574 TACACCATTCATGCTTTATAAGGATGCATGCAACAGGAAATCCAACCAACAGAACTTGGG 333633 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 | ||||||| ||| || || ||| || || | |||| | | ||| || Sbjct 333634 TATGATCAAATCTTCTAATCTGTGTTGTGAGATTGTTGAATACTCTTCCCCAGAAGAAGT 333693 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC 112492 ||||| |||||| | |||||| | || | || | ||| || || ||| | Sbjct 333694 TGCTGTTTGTAACTTAGCATCAGTTGCATTACCAGCATTTGTTGAAAGTGATGAAAACTC 333753 Query 112493 A------TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546 | | | | | ||| ||| | || ||| | || ||| ||| | || || | || Sbjct 333754 ATCGTGGTATAACTTTGAGAAATTACATGAAATAACCAAAGTTGTTGCCAAGAATTTGAA 333813 Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 112606 | | || || ||||| | ||| || ||||| ||| | | ||| || |||||| | Sbjct 333814 TAAGATCATCGACAGAAACTATTATCCGGTTGAAGAAGCTAGAAGATCCAACATGAGAAA 333873 Query 112607 CCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 112666 | | ||||||| | | || || |||||| | || |||| ||||| | | | | Sbjct 333874 CAGACCAATTGCTGTTGGGGTTCAAGGTTTAGCTGATGCCTTCATGATGTTAAGATTGCC 333933 Query 112667 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGC 112726 ||||||||| | | | || | ||| | || | || ||||| || || || ||||| Sbjct 333934 ATTTGATTCTGCCCAGGCTAGAGAACTAAACATACAAATTTTTGAAACTATATACCACGC 333993 Query 112727 CGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 112786 | | || || ||| ||| |||| | ||||| |||||||||||||||| || || Sbjct 333994 TTCATTGGAAGCTAGTATTGAGCTGGCCAAAGTTGACGGTCCATATGAAACCTACGAAGG 334053 Query 112787 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA--CCAAGCTT 112844 |||||||| ||||| | | ||||||||| ||||| ||| ||| |||| | Sbjct 334054 CTCTCCAGCAAGTCAAGGTTTATTACAATTTGATTTGTGG---GGTAAGAAGCCAACCGA 334110 Query 112845 C-ACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903 | | || ||||| | | |||||| || || ||| | | ||| | | Sbjct 334111 CTTATGGGATTGGGATGGATTAAAGGAAAAGATTTCCAAGTTTGGTTTGAGAAACTCTTT 334170 Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963 || | |||||||||||||| |||||||| | ||||| |||||| | |||||||| || Sbjct 334171 ATTAGTTGCACCAATGCCAACTGCCTCCACTTCTCAAATTTTGGGTTACAATGAATGTTT 334230 Query 112964 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023 |||||| ||||| | || || ||| |||||| | || || ||||| |||||| Sbjct 334231 TGAACCATACACCTCTAATATTTATTCCAGAAGAGTTTTAGCCGGTGAGTTCCAGATTGT 334290 Query 113024 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT---ATGAA 113080 ||| | | || ||| | || || || | ||| || ||| ||||| Sbjct 334291 TAACCCTTACATGTTGAGAGACTTGGTTGATATGGGATTATGG---AACGATTCCATGAA 334347 Query 113081 GGATCTCA----TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATG 113136 | | | || | ||| | |||| || |||||||| | | |||||| | | Sbjct 334348 GAACCACATTATTTCTGACAACGGG----TCGATTCAAAACTTGCCTAACATTCCACAAG 334403 Query 113137 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGG 113196 |||| ||| | | ||| ||||||||||||||| | ||| | | || || |||| Sbjct 334404 AAATCAAGGATATCTACAAGACAGTTTGGGAAATCTCGCAAAAGTCTATTATCGATATGG 334463 Query 113197 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAG-- 113254 | || || | ||| || |||||||||| |||||||||||| ||||| |||| Sbjct 334464 CTGCCGACAGAGGTGCCTACATTGATCAATCTCAAAGTATGAA--CATTCACCTAAAGAA 334521 Query 113255 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 113314 || || ||| || || | || ||||| | || | ||||||||||| | || || Sbjct 334522 CCCTACCATGGGTAAACTGACATCGATGCATTTCTATGGATGGAAGAAGGGATTGAAGAC 334581 Query 113315 GGGGATGTATTAC 113327 || ||||||||| Sbjct 334582 TGGTATGTATTAC 334594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742112906640