Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 163 3e-35 >seq4 Length=942658 Score = 163 bits (180), Expect = 3e-35 Identities = 676/1057 (64%), Gaps = 27/1057 (3%) Strand=Plus/Minus Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG 110161 |||| |||| ||| ||||| || | | |||| || | | ||||||| || | || || Sbjct 333911 CATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATCTTCTAG 333852 Query 110162 CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCT 110221 | ||| || || ||| |||| | |||||||| | ||| | |||||| | ||| | Sbjct 333851 CTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAACAACTT 333792 Query 110222 TCGTGATTTCATGGAGTTTGTC---GTAATCGAACG-----TTTTCGTCTCCTTATTGAC 110273 | || |||||||| | ||| || || || ||| ||||| || | || || Sbjct 333791 TGGTTATTTCATGTAATTTCTCAAAGTTATACCACGATGAGTTTTCATCACTTTCA--AC 333734 Query 110274 ATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTA 110333 | || || | |||| || || | || || |||| | || ||| | | ||| Sbjct 333733 AAATGCTGGTAATGCAACTGATGCTAAGTTACAAACAGCAACTTCTTCTGGGGAAGAGTA 333674 Query 110334 TTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGA 110393 ||| | ||| || ||||| || ||| || || | ||||||||||| || || || Sbjct 333673 TTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGA 333614 Query 110394 TTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTT 110453 ||| |||||||||||||||||| |||||| |||| ||||| ||||| ||||||| | Sbjct 333613 TTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGCTTC 333554 Query 110454 GAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTC 110513 | ||| | | ||||| | || || || | || | |||||| | || Sbjct 333553 CAAAATAGAGTACCATAATTTTTGAGCCTTGATGGTGGATCTACCTCTACCTTCTTTTTC 333494 Query 110514 GTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACC-----CTTC 110568 || || ||| || || || ||||| | || || |||||| | ||| |||| Sbjct 333493 ATATTTTTCGTATAATTCTTCGAATTCATCACCATAAACATCACTCAAACCTGGGGCTTC 333434 Query 110569 GCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628 |||| | || | |||| | ||| | | | | ||||| ||||||||||| | Sbjct 333433 -ACTTG--GTGAAAAAAGA--GTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAA 333379 Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCATCACCTTGGTT 110687 |||| |||||| | || | ||| | || | || || ||||| | ||| ||||| Sbjct 333378 TCAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTGA-TTTCTTCCTTACCATGGTT 333320 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 | | || | |||||| | ||||| | ||||||||| |||||||| | ||| | Sbjct 333319 TTTTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATATAAAGCAAA 333260 Query 110748 GGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCC 110803 || || ||| | ||| | || | ||||| | || || || || || | Sbjct 333259 GGCACCAGGTCTTTTG-TTACCACCTTGATCGACATATCTAGCGGTATTGTTAAACACTC 333201 Query 110804 TGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGG 110863 | | ||| ||||| || || | |||| ||| || ||||| ||| || | | Sbjct 333200 TAACCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGAACCGGTCG 333141 Query 110864 CACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACT 110923 | ||| | ||| || || | |||||||||||| || ||| ||| | ||||| | Sbjct 333140 ATCTAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAGAGCACATT 333081 Query 110924 CTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAG 110983 | | | ||| |||||||||| ||||| ||||| | | | |||| || || |||| Sbjct 333080 GTTTTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAAGAAACAAG 333021 Query 110984 AAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACA 111043 ||||||| ||| | || || || ||||| || | || || | ||||| | || Sbjct 333020 AAGACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGT 332961 Query 111044 GACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATAC 111103 | || ||||| || || || || | || ||| ||| | ||| ||||||| Sbjct 332960 ATCTTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACCATGAATAC 332901 Query 111104 CAATGGCAACTCGCATGAACATATATTGAGGCGTTTC 111140 ||| ||||||| ||| | || || ||||| |||| Sbjct 332900 CAACAGCAACTCTCATAATCAAATGCTGAGGTCTTTC 332864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975727598600