Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 196 6e-45 >seq4 Length=942658 Score = 196 bits (216), Expect = 6e-45 Identities = 1032/1630 (63%), Gaps = 37/1630 (2%) Strand=Plus/Minus Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655 || ||||| || ||||| | ||| | ||||| | || | |||||| || | || || Sbjct 334593 TAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTA 334534 Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCA 105715 ||| || || | | | | || |||||||||||| || |||||| || ||| Sbjct 334533 CCCATGGTAGGGTTCTTTAGGTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCT 334474 Query 105716 CGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGA 105775 | | || |||||||| || | | ||| | ||||||||| ||||| ||||| | Sbjct 334473 CTGTCGGCAGCCATATCGATAATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATA 334414 Query 105776 TTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATG 105835 | |||||| || | ||| || | | | |||||||| || || | | ||| Sbjct 334413 TCCTTGATTTCTTGTGGAATGTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATG 334354 Query 105836 AGATCCTTCAT---ATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGC 105892 | | |||||| ||| || ||| | || || | | || | | | | Sbjct 334353 TGGTTCTTCATGGAATCGTT---CCATAATCCCATATCAACCAAGTCTCTCAACATGTAA 334297 Query 105893 TTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAG 105952 ||| |||||| ||||| || || | |||||| ||| || || | ||||| Sbjct 334296 GGGTTAACAATCTGGAACTCACCGGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTAT 334237 Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012 |||||||| |||||||| | |||||| ||||| | |||||||| |||||||||||||| Sbjct 334236 GGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCA 334177 Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGTTCCTTGAGAACATCCCAG 106069 | || | | ||| | | ||| |||| || |||||| | ||||||| Sbjct 334176 ACTAATAAAGAGTTTCTCAAACCAAA---CTTGGAAATCTTTTCCTTTAATCCATCCCAA 334120 Query 106070 TCGTAGTTGA-GCTTGGTTTCACCTT--CCCACATATCAAATTGAAGCACCCCTTGGGAC 106126 || | | | |||| ||| || |||||| ||||||||| | | ||||| || Sbjct 334119 TCCCATAAGTCGGTTGGCTTC---TTACCCCACAAATCAAATTGTAATAAACCTTG--AC 334065 Query 106127 GTG--GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184 || ||||| || || | || ||||| | ||| | ||| |||| ||| || | Sbjct 334064 TTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAATACTAG 334005 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | |||| || ||||| || || |||||||| || | || | || | || | Sbjct 334004 CTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGCCTGGG 333945 Query 106245 CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 106304 | |||||||||| | | ||| || || |||| || | ||||||||| || | | Sbjct 333944 CAGAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCCAACAG 333885 Query 106305 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 106364 |||| ||||||| || ||| || || ||| || ||||| |||||| | ||||||| Sbjct 333884 CAATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTTTCTGT 333825 Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424 | |||| || | ||| |||| ||||| || || |||||||| | ||| ||| | | Sbjct 333824 CGATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATTTCTCAAAGT 333765 Query 106425 CAAA--AGTGCGAGTCT-CTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAAT 106478 | | | |||| | | ||| | ||| | ||| | || | |||||| || | Sbjct 333764 TATACCACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAATGCAACTGATGCTAAGT 333705 Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538 | |||||||| || || | ||| || | ||| || ||||| || ||| Sbjct 333704 TACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGATTAGAAG 333645 Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598 || ||| | ||||| |||| |||||| || ||||||| |||||||| || |||| Sbjct 333644 ATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCCTGTTGCATGCATCCTTATAAAGCA 333585 Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCG-GCGGCT 106657 || | || || || || || ||||||| | | ||| | | ||| | | | | || Sbjct 333584 TGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTTTTGAGCCT 333525 Query 106658 GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717 | | ||| | | | || || || || ||| ||| | |||| || || Sbjct 333524 TG-ATGGTGGATCTACCTCTACCTTCTTTTTCATATTTTTCGTATAATTCTTCGAATTCA 333466 Query 106718 TCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCA 106777 ||||| | || | |||||| || | ||| | ||||||| ||||| | Sbjct 333465 TCACCATAAACATCACTCAAACCTGGGGCTTCACTTGGTGAAAAAAGAGTCCATTCTTGA 333406 Query 106778 CCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA 106837 | ||||| | ||||||||| | || | |||||| | | | || | |||||| Sbjct 333405 TTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATCTCTT 333346 Query 106838 -CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896 | | || ||||| | ||| ||||| || | |||| || || | ||||| || Sbjct 333345 GCTCTGATT-TCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATCTGC 333287 Query 106897 GTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTA 106952 |||||||||||| ||||| | || | | || |||| | || | |||||| | Sbjct 333286 GTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACC-ACCTTGATCGA 333228 Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012 |||| | || || |||||| || | || ||||||||| ||||| | ||| ||| | Sbjct 333227 CATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATGTACCGT 333168 Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072 | || || |||| ||| | | ||| | || || ||||| | |||||||| | Sbjct 333167 TGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACCAC 333108 Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132 |||| ||| || || | ||||| | | | || |||| ||||| | || || | Sbjct 333107 CAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGAAT 333048 Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 107192 | || | | || | | ||| ||| ||||| || |||||| ||||||||||| | Sbjct 333047 CATCTTGCATAGCAACTAAGAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATTAA 332988 Query 107193 AGAGGGTTGG 107202 | | ||||| Sbjct 332987 ACAAAGTTGG 332978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980527133880