Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq4 196 6e-45
>seq4
Length=942658
Score = 196 bits (216), Expect = 6e-45
Identities = 1032/1630 (63%), Gaps = 37/1630 (2%)
Strand=Plus/Minus
Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655
|| ||||| || ||||| | ||| | ||||| | || | |||||| || | || ||
Sbjct 334593 TAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTA 334534
Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCA 105715
||| || || | | | | || |||||||||||| || |||||| || |||
Sbjct 334533 CCCATGGTAGGGTTCTTTAGGTGAATGTTCATACTTTGAGATTGATCAATGTAGGCACCT 334474
Query 105716 CGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGA 105775
| | || |||||||| || | | ||| | ||||||||| ||||| ||||| |
Sbjct 334473 CTGTCGGCAGCCATATCGATAATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAGATA 334414
Query 105776 TTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATG 105835
| |||||| || | ||| || | | | |||||||| || || | | |||
Sbjct 334413 TCCTTGATTTCTTGTGGAATGTTAGGCAAGTTTTGAATCGACCCGTTGTCAGAAATAATG 334354
Query 105836 AGATCCTTCAT---ATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGC 105892
| | |||||| ||| || ||| | || || | | || | | | |
Sbjct 334353 TGGTTCTTCATGGAATCGTT---CCATAATCCCATATCAACCAAGTCTCTCAACATGTAA 334297
Query 105893 TTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAG 105952
||| |||||| ||||| || || | |||||| ||| || || | |||||
Sbjct 334296 GGGTTAACAATCTGGAACTCACCGGCTAAAACTCTTCTGGAATAAATATTAGAGGTGTAT 334237
Query 105953 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 106012
|||||||| |||||||| | |||||| ||||| | |||||||| ||||||||||||||
Sbjct 334236 GGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCA 334177
Query 106013 ATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGTTCCTTGAGAACATCCCAG 106069
| || | | ||| | | ||| |||| || |||||| | |||||||
Sbjct 334176 ACTAATAAAGAGTTTCTCAAACCAAA---CTTGGAAATCTTTTCCTTTAATCCATCCCAA 334120
Query 106070 TCGTAGTTGA-GCTTGGTTTCACCTT--CCCACATATCAAATTGAAGCACCCCTTGGGAC 106126
|| | | | |||| ||| || |||||| ||||||||| | | ||||| ||
Sbjct 334119 TCCCATAAGTCGGTTGGCTTC---TTACCCCACAAATCAAATTGTAATAAACCTTG--AC 334065
Query 106127 GTG--GGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184
|| ||||| || || | || ||||| | ||| | ||| |||| ||| || |
Sbjct 334064 TTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAATACTAG 334005
Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244
| |||| || ||||| || || |||||||| || | || | || | || |
Sbjct 334004 CTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGCCTGGG 333945
Query 106245 CTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAAC 106304
| |||||||||| | | ||| || || |||| || | ||||||||| || | |
Sbjct 333944 CAGAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCCAACAG 333885
Query 106305 CAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGT 106364
|||| ||||||| || ||| || || ||| || ||||| |||||| | |||||||
Sbjct 333884 CAATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTTTCTGT 333825
Query 106365 CAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT 106424
| |||| || | ||| |||| ||||| || || |||||||| | ||| ||| | |
Sbjct 333824 CGATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATTTCTCAAAGT 333765
Query 106425 CAAA--AGTGCGAGTCT-CTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAAT 106478
| | | |||| | | ||| | ||| | ||| | || | |||||| || |
Sbjct 333764 TATACCACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAATGCAACTGATGCTAAGT 333705
Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538
| |||||||| || || | ||| || | ||| || ||||| || |||
Sbjct 333704 TACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGATTAGAAG 333645
Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598
|| ||| | ||||| |||| |||||| || ||||||| |||||||| || ||||
Sbjct 333644 ATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCCTGTTGCATGCATCCTTATAAAGCA 333585
Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCG-GCGGCT 106657
|| | || || || || || ||||||| | | ||| | | ||| | | | | ||
Sbjct 333584 TGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTTTTGAGCCT 333525
Query 106658 GGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCC 106717
| | ||| | | | || || || || ||| ||| | |||| || ||
Sbjct 333524 TG-ATGGTGGATCTACCTCTACCTTCTTTTTCATATTTTTCGTATAATTCTTCGAATTCA 333466
Query 106718 TCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCA 106777
||||| | || | |||||| || | ||| | ||||||| ||||| |
Sbjct 333465 TCACCATAAACATCACTCAAACCTGGGGCTTCACTTGGTGAAAAAAGAGTCCATTCTTGA 333406
Query 106778 CCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA 106837
| ||||| | ||||||||| | || | |||||| | | | || | ||||||
Sbjct 333405 TTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATCTCTT 333346
Query 106838 -CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896
| | || ||||| | ||| ||||| || | |||| || || | ||||| ||
Sbjct 333345 GCTCTGATT-TCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATCTGC 333287
Query 106897 GTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTA 106952
|||||||||||| ||||| | || | | || |||| | || | |||||| |
Sbjct 333286 GTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACC-ACCTTGATCGA 333228
Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012
|||| | || || |||||| || | || ||||||||| ||||| | ||| ||| |
Sbjct 333227 CATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATGTACCGT 333168
Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072
| || || |||| ||| | | ||| | || || ||||| | |||||||| |
Sbjct 333167 TGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACCAC 333108
Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132
|||| ||| || || | ||||| | | | || |||| ||||| | || || |
Sbjct 333107 CAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGAAT 333048
Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 107192
| || | | || | | ||| ||| ||||| || |||||| ||||||||||| |
Sbjct 333047 CATCTTGCATAGCAACTAAGAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATTAA 332988
Query 107193 AGAGGGTTGG 107202
| | |||||
Sbjct 332987 ACAAAGTTGG 332978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980527133880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |