Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 499 3e-136
seq5 291 9e-74
seq3 113 5e-20
>seq4
Length=942658
Score = 499 bits (552), Expect = 3e-136
Identities = 1216/1839 (66%), Gaps = 49/1839 (3%)
Strand=Plus/Minus
Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072
|||| || ||||||||||||||||| || || |||||||||||||||||||
Sbjct 334602 GTTCTCAAGTAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGAT 334543
Query 47073 GTTAATTTAGAATAACTAGG-TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131
|| | |||| |||| |||| | ||||| || | | |||| ||||||||
Sbjct 334542 GTCAGTTTACCCATGGTAGGGTTCTTTAGG-TGAATGTTCATACTTTGAGATTGATCAAT 334484
Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191
| |||||||| || || |||||||| | |||| | |||| | || ||||| |||||
Sbjct 334483 GTAGGCACCTCTGTCGGCAGCCATATCGATAATAGACTTTTGCGAGATTTCCCAAACTGT 334424
Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGAGATTAGTA---TTTTGAATAGATCCTCCgtt 47248
|| || || | || || |||| ||| | |||| |||||||| || || |||
Sbjct 334423 CTTGTAGATATCCTTGATTTCTTGTGGAATGTTAGGCAAGTTTTGAATCGACCC---GTT 334367
Query 47249 ttct---ataattttgtttttta---attcatttgaccaaagttttcgttcagttaatgt 47302
|| ||||| | ||| || | | || || ||| | | ||| ||
Sbjct 334366 GTCAGAAATAATGTGGTTCTTCATGGAATCGTT---CCATAATCCCATATCAACCAAGTC 334310
Query 47303 ttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATAT 47362
| | || | | ||| |||||||| || || || || | || ||||| | | ||| ||
Sbjct 334309 TCTCAACATGTAAGGGTTAACAATCTGGAACTCACCGGCTAAAACTCTTCTGGAATAAAT 334250
Query 47363 ATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGT 47422
|||| || |||||||| | | ||||||| | || |||||||||| ||| || || ||
Sbjct 334249 ATTAGAGGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGT 334190
Query 47423 AGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNN 47482
||||| | |||||||||||| ||||| | ||| | || ||||
Sbjct 334189 TGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACCAAACTTGGAAATCTTTTCCTTTAA 334130
Query 47483 NNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCC 47542
| ||||||||| | || | ||| | ||| |||||| |||| | | ||
Sbjct 334129 TCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACCCCACAAATCAAATTGTAATAAACC 334070
Query 47543 TTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACA 47602
|| |||| ||||| || | || |||| ||| ||||||| | ||| || || |||
Sbjct 334069 TTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAAT 334010
Query 47603 ACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGC 47662
||| |||||||||| | | ||||| |||||||| |||| ||||||||| | || ||
Sbjct 334009 ACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGC 333950
Query 47663 TTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACC 47722
| | || ||||| || | || | ||| || || |||||||| ||
Sbjct 333949 CTGGGCAGAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCC 333890
Query 47723 AATACCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTT 47782
|| | |||||||||| | | | || || ||||||| | ||||| | |||
Sbjct 333889 AACAGCAATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTT 333830
Query 47783 TATATCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATT 47842
| | || || || ||||| | | ||||| |||||| |
Sbjct 333829 TCTGTCGATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATTTCTC 333770
Query 47843 AAAATCAAAC---------TTGTTAT---TTATAACAAAC-CTATTAAGTGCTATAGATG 47889
||| | | || || | || || |||||| || ||| ||| | ||||
Sbjct 333769 AAAGTTATACCACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAA-TGCAACTGATG 333711
Query 47890 CTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGAT 47949
||| ||||| ||||| || || | ||| || |||| | || ||| ||| ||||
Sbjct 333710 CTAAGTTACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGAT 333651
Query 47950 TACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGCGTCCTT 48007
|| | ||||||| ||||||| || || || || ||| |||| ||||| |||||
Sbjct 333650 TAGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCC--TGTTGCATGCATCCTT 333593
Query 48008 GTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGT 48067
|||||||| || ||||| || |||||| |||| | ||| | ||||| | ||| | |
Sbjct 333592 ATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTT 333533
Query 48068 CCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTC 48127
|||||| || | |||| || || || | ||| ||||| ||||| | ||
Sbjct 333532 TTGAGCCTTGATGGTGGATCTACCTCTACCTTCTTTTTCATATTTTTCGTATAATTCTTC 333473
Query 48128 AAATTCATCCCCATACACATTA-TCTAACCCAGGACATTCATTAGGACACATCAATGACC 48186
|||||||| ||||| |||| | || |||| || | |||| | || | | | | ||
Sbjct 333472 GAATTCATCACCATAAACATCACTCAAACCTGGGGC-TTCACTTGGTGAAAAAAGAGTCC 333414
Query 48187 AATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATA 48246
| || | || |||| ||||| |||| |||| ||| | ||||| | || || |
Sbjct 333413 ATTCTTGATTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACA 333354
Query 48247 AATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTA 48306
|||| || | ||| | |||||| || ||| || || ||| |||| |||||| | |
Sbjct 333353 AATCTCTTGCTCTGATTTCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAA 333294
Query 48307 TATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTT 48366
|||| || |||||||| || | ||||| || | |||| |||| ||| ||||| ||||
Sbjct 333293 TATCTGCGTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACCACCTT 333234
Query 48367 GATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATA 48426
|||| | |||||| || ||||||||| | ||||| | |||||| | ||||| || |||
Sbjct 333233 GATCGACATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATG 333174
Query 48427 TACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCT 48485
|||| ||||| || | ||||||| || | | ||| ||||| ||| || || |||
Sbjct 333173 TACCGTTGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAA-ACCA 333115
Query 48486 ATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCT 48545
|||||||| || | || || || |||||||| |||| | |||||||||||| |||||
Sbjct 333114 ATACCACCAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCA 333055
Query 48546 ATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGAC---AAGTT 48602
||| ||||||| |||| | || |||||| |||||||| ||| | ||
Sbjct 333054 ATAGAATCATCTTGCATAGCAACTAAGAAACAAGAAGACATTT---GATTTCTTGGGGTA 332998
Query 48603 CCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATAT 48662
|| | |||||| || |||||||| ||||| |||| || | | || | | |||||
Sbjct 332997 CCAGCATTAAACAAAGTTGGAGAAGCATGGGTAAAGTATCTTTTAGACATTAGATTATAG 332938
Query 48663 GTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATA 48722
||||||||| || | |||||| ||| ||||| | || || | ||| | || |
Sbjct 332937 GTTTCAATAGCACTTTGTATATCATCACCATGAATACCAACAGCAACTCTCATAATCAAA 332878
Query 48723 TATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTT 48782
| ||||||||||| |||||| ||| | | |||| | ||| ||| ||||||| |||
Sbjct 332877 TGCTGAGGTCTTTCTGCAATTTGACCATTCAATCTCAACAAATAAGATCTTTCCAACGTT 332818
Query 48783 TTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCAT 48819
|| ||||||||||||||||| ||||| || ||||||
Sbjct 332817 TTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCAT 332781
>seq5
Length=831479
Score = 291 bits (322), Expect = 9e-74
Identities = 606/889 (68%), Gaps = 19/889 (2%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
||||| || |||| ||||| ||||||||||| || || || || |||| || || |
Sbjct 305283 TTTTGGTAATCGGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTT 305224
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
||||| |||||||| |||||| | || || ||| | || | | || | | ||
Sbjct 305223 TCCATGAAATCAAAAGGATTTGTGACGTTGTATCTCTTGTCACAACCAAGAGAAACAAGA 305164
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
||||| || || ||||||| | |||| ||||| ||| ||||| || | |||
Sbjct 305163 AGTCTGTCGGCAACAAATTCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAG 305104
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATA 18909
|| | || || || ||||| | | || |||||| || | || || ||| || ||
Sbjct 305103 TTGGCTGGAAGAGCGTCTGTGAAATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATC 305044
Query 18910 GATACAACTCTATCTTC-ATTAGGAGGGTATAGA--AGATGTTTAAACATCAAACATGCA 18966
| | | | ||||| | | | |||||| | | ||| || | ||||| |||
Sbjct 305043 --TTGAGCACGATCTTGGAATCTG-GGGTATTGTTCAAATGGGAGAATAATAAACAAGCA 304987
Query 18967 AAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGC 19026
||||| |||| || || ||||| | || ||||| || |||||||| ||||| |||
Sbjct 304986 AAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGC 304927
Query 19027 ATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCT 19086
|||| ||||||||||| |||||||| || |||||||| ||||| || || || ||||||
Sbjct 304926 ATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCT 304867
Query 19087 TCTACTGCTGCAAAAGCAACTAGTCTTTCTCC--ATAACTAGCATCATTATTATGAATCC 19144
|| || || ||||| ||||||| |||||| || |||| |||| | || ||||
Sbjct 304866 TCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAAT--GCATTTTCATCGCACATCC 304809
Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204
|| ||| ||||| || ||||| | ||| | |||||| || | || || | ||| ||||
Sbjct 304808 ATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATA 304749
Query 19205 GATACATACGCT-CATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCT 19263
| | | || | | | || ||| || ||||| | || |||||||| ||| ||||
Sbjct 304748 -AGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCC 304690
Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323
||||| || ||||| || || || || || || ||||| | ||||| | || ||
Sbjct 304689 GAATGGATGTTTTCCATCATGATTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGC 304630
Query 19324 ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAA 19383
|| ||| | || |||| ||||||||||| || || || ||||| ||| ||||||
Sbjct 304629 ACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAA 304570
Query 19384 AATGCTAATACATGTTTAAT--AAAATGTTT-TTCATC--TGAGGTTAATGTATTCCAAT 19438
|| || || || |||| ||||| ||| | ||| | || | || ||||| |
Sbjct 304569 AAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTG--TTCCAGT 304512
Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498
| | | || ||||| || || | |||||| | ||||| ||||| || || || ||||
Sbjct 304511 CGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTT 304452
Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCT 19547
| ||||| | ||| || ||| | |||| || || || | ||||||||
Sbjct 304451 TGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGAGCACAAATCT 304403
>seq3
Length=1238071
Score = 113 bits (124), Expect = 5e-20
Identities = 198/287 (69%), Gaps = 2/287 (1%)
Strand=Plus/Minus
Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAA 48243
|||||| ||||| ||| ||| | |||| || | ||| |||||||| || || | ||
Sbjct 367299 ACCAATAATCATCGCTTTCCACTTTTTTCATGAACAAATCGGGTATCCATAGTGCAAGAA 367240
Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAG-TTCAAGAAAGTCC 48302
||| || || | ||| | |||||| || ||| || |||| ||||| ||| ||
Sbjct 367239 ATAGGTCTCTTGCCCTTCTTGCTTCATCACCRTGATTTTTTCTAAGATTCAAAAAA-TCA 367181
Query 48303 ATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCT 48362
| | ||| |||||||| |||||||||||||| | |||| |||| |||||| |||
Sbjct 367180 AAAACATCCGCATGCCAAGGTTCTAAATATATACAAAAAGCACCAGGTCTTTTATTTCCT 367121
Query 48363 CCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTT 48422
||||| || | |||||| ||||| || | ||| | |||| || || | ||||
Sbjct 367120 CCTTGGTCAACATATCTTGCAGTTGAATTGAATACTTTCAACAGAGGAACCAAACCAGAA 367061
Query 48423 GATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATT 48469
|| | ||||| | || ||| | || ||||| ||||| |||||
Sbjct 367060 GACGTCCCATTAGAACCTTTAATGTGGCTACCACTGGCTCTKATATT 367014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108540024680
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