Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6 291 7e-73 seq10 179 3e-39 seq1 140 3e-27 seq2 111 1e-18 seq5 86.0 5e-11 >seq6 Length=817167 Score = 291 bits (322), Expect = 7e-73 Identities = 559/814 (69%), Gaps = 21/814 (3%) Strand=Plus/Plus Query 551908 TAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTG 551967 ||||||||||||| ||||||||||| || | | || ||| |||||||| | |||| Sbjct 298982 TAAGAACTGCTTGTGAAAGAGCCAAGAGAACCTTATCTTCTTCCGCTCAAACCTCCATTG 299041 Query 551968 AAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTG 552027 || | ||||| |||||||| || |||||||| | || | ||| | || || | ||| | Sbjct 299042 AAATTGATTCCTTATTTGAAGGTATTGATTACTACACCTCCATTACCAGAGCTAGATTCG 299101 Query 552028 AAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAG 552087 |||| | ||| || | || ||| || | || || || ||| | || || | | Sbjct 299102 AAGAATTATGTCAAGACTTATTCAGATCTACTTTAGACCCTGTTGAAAAGGTGTTGAAGG 299161 Query 552088 ATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 | || |||||||| || ||| || |||||||||| ||||||||||| ||||| |||| Sbjct 299162 ACTCCAAGATTGACAAGTCCTCTGTTGATGAAATTGTCCTTGTTGGTGGTTCTACCAGAA 299221 Query 552148 TTCCTAAAATTCGCGAAATGTTAAGTTC---TTATTTCAATGGTAAAAAATTAAATGAAA 552204 |||| || ||| ||| ||| ||| || ||||| ||||| || ||| || Sbjct 299222 TTCCAAAGGTTC---AAAAGTTGGTTTCCGACTACTTCAACGGTAAGGAACCAAA--CAA 299276 Query 552205 GT--GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 || |||| |||||||| |||||||| || ||||| || | ||||| ||| | | | Sbjct 299277 GTCCATTAACCCAGATGAAGCTGTTGCTTACGGTGCTGCCGTCCAAGCTGCTGTCTTGAC 299336 Query 552263 TG--GACAAACTGATGAAAAACTACAAAATATTGTACTT-GTAGATGTTACTCCTCTATC 552319 || ||| || | | || ||| ||| || || | || ||||||||||||| |||| Sbjct 299337 TGGTGACCAA-TCTTCTAAGACT-CAAGAT-TTRTTGTTATTAGATGTTACTCCATTATC 299393 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 | | ||| | ||||| | ||| ||| | ||||| || | ||| ||||| ||||||| Sbjct 299394 TTTAGGTATTGAAACTGCTGGTGGTGTCATGACCAAGTTAATCCCAAGAAACTCTACTAT 299453 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 || ||||| || ||| || || || || | ||||| ||| ||| |||| || Sbjct 299454 CCCATGTAAGAAGTCTGAAACTTTCTCCACCTACGCTGATAACCAACCTGGTGTTTTGAT 299513 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT-GGTACTTTTA 552498 |||| | |||||||| |||||| ||||| || || || || ||| |||| || Sbjct 299514 TCAAGTCTTTGAAGGTGAAAGAGCTAGAACTAAGGACAACAA-CATCTTRGGTAAGTTCG 299572 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | ||| |||||||| || ||||| | || || || |||||||||||||| ||||||| Sbjct 299573 AATTATCTGGTATTCCACCAGCTCCAAGAGGTGTTCCTCAAATTGAAGTTACCTTCGATA 299632 Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAA 552618 ||||||| ||||| ||| |||| || | ||| ||| || || |||| | ||| Sbjct 299633 TCGATGCTAATGGTATTCTGAACGTCTCCGCTCTTGAAAAGGGTACTGGTAAGACTCAAA 299692 Query 552619 ATATTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACGTATGGTCG 552678 | ||||| | | |||||||| || | ||| | ||| || | |||||| Sbjct 299693 AGATTACCATCACCAACGACAAGGGTAGATTATCTCAAGAAGATATTGAAAGAATGGTCT 299752 Query 552679 AAGAAGCTAAAGAATT---TGAAGAAGCTGATAA 552709 |||||| || | || ||||||| ||| || Sbjct 299753 CTGAAGCTGAAAAGTTCAAGGAAGAAGATGAAAA 299786 Score = 156 bits (172), Expect = 3e-32 Identities = 363/543 (67%), Gaps = 12/543 (2%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| |||||||| || || || ||||||| | |||| || Sbjct 298203 AGCTGTTGGTATTGATTTAGGTACTACCTACTCGTGTGTTGCACACTTCTCCAATGATAG 298262 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||||| | || || || |||||||||||||| ||||| |||| ||| | ||||| Sbjct 298263 AGTTGAAATTCTCGCTAACGACCAAGGTAACAGAACCACTCCTTCTTTCGTTGCCTTCAC 298322 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || ||| || |||||||||| || || | ||||| || || || || Sbjct 298323 CGACACCGAAAGATTGATTGGTGATGCTGCTAAGAACCAAGCTGCTATGAACCCACAAAA 298382 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| |||| || || || | || ||||| |||| || | || | ||||| | Sbjct 298383 CACTGTTTTCGACGCCAAGAGATTGATTGGTAGAAAGTTCGAAGACCCAGAAGTTCAAAC 298442 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG- 550289 ||||||||||| | || ||| | |||| | | || || || | ||| ||| Sbjct 298443 CGATATGAAGCACTTCCCATTCAAGGTTGTCGACAAGGCCGGTAAGCCAAACATTCAAGT 298502 Query 550290 CTACTCATGAAGGATCTGTTAAACAA---TTTTCA--CCAGAACAAATTTCATCTATGGT 550344 | ||| |||| || |||| | |||||| |||||| |||| || |||||| | Sbjct 298503 CGACT--ACAAGG----GTGAAACCAAGGTTTTCACTCCAGAAGAAATCTCTTCTATGAT 298556 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 ||| | || ||||| |||| || ||| ||||| | | |||| ||||| || Sbjct 298557 TTTGACTAAGATGAAGGAAACCGCTGAAGCTACCCTTGGTGACAAGGTTAACGATGCCGT 298616 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || || || || || || || || ||||| ||| | |||||||| || |||||||| Sbjct 298617 TATTACCGTTCCTGCTTACTTCAACGACTCCCAAAGACAAGCTACCAAGGATGCTGGTGC 298676 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| | || || | | || ||||| ||||| || || ||||| |||| || Sbjct 298677 CATTGCTGGTTTGAACGTCTTGAGAATCATCAACGAACCAACCGCCGCTGCTATTGCCTA 298736 Query 550525 TGG 550527 || Sbjct 298737 CGG 298739 Score = 141 bits (156), Expect = 7e-28 Identities = 358/540 (66%), Gaps = 17/540 (3%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTT--GGCAAAA----TGGTAAA 550051 ||||| |||||||| ||||| || |||||||| ||| | | ||| | |||| Sbjct 75326 GGTATCGATTTAGGTACCACCTACTCTTGTGTTGCTGTGTACGACAACACTACTGGT--- 75382 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||||||||||||| || |||||||||||| ||| ||||||| ||| ||||||| Sbjct 75383 GTTGAAATTATTGCCAACGAACAAGGTAACAGAGTTACCCCATCTTTCGTTGCTTTCACC 75442 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 | ||| || |||||||||| || || | ||||| || ||| || ||||| Sbjct 75443 CCAGAAGAAAGATTGATTGGTGATGCTGCTAAGAACCAAGCTGCTCTTAACCCAACCAAC 75502 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| || || || | || || || ||| |||| ||| | || || Sbjct 75503 ACCGTTTTCGACGCCAAGAGATTGATCGGTAGATCTTTTGCTGAAGAATCCGTCCAAAAG 75562 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-- 550289 ||||| ||| ||||| ||| | |||| ||| ||||| || | || |||| Sbjct 75563 GATATCAAGACCTGGCCATTCAAGGTTGTCGATGACAACGGAAACCCAAAGATCGAAGTG 75622 Query 550290 --CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 ||||| |||| | | ||| || || || || |||| || || |||||||| Sbjct 75623 TCCTACT-TGGAAGAAAC---CAAAACCTTCTCTCCTCAAGAAATCTCCTCCATGGTTTT 75678 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | || ||||| ||| || || | |||||| || | || || | Sbjct 75679 GACCAAGATGAAGGAAATTGCTGAAGCCAAGTTAGGTCAATCCGTCGACAAGGCTGTTGT 75738 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||||| ||||| || || || ||| | ||| | |||||||| || |||||||| || Sbjct 75739 CACTGTCCCAGCTTACTTCAACGACGCTCAAAGACAAGCTACCAAGGATGCTGGTTCCAT 75798 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 |||||| | || ||| | | || ||||| ||||| || |||||||| |||| || || Sbjct 75799 TGCTGGTTTGAACGTTTTGAGAATCATCAACGAACCAACCGCTGCTGCCATTGCTTACGG 75858 >seq10 Length=220419 Score = 179 bits (198), Expect = 3e-39 Identities = 427/642 (67%), Gaps = 22/642 (3%) Strand=Plus/Plus Query 551958 ACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGG 552017 |||| |||||| | || ||||| |||| || ||||||| | | | | | || Sbjct 13576 ACCAGAATTGAAATTGACTCATTTGTTGATGGCATTGATTTCAGTGAACAATTAACTAGA 13635 Query 552018 GCCAAATTTGAAGATATTTGTTCTG-ATCTCTTTAGAAAAACAATTGAACCAGTAGAACA 552076 ||||| || ||||| ||| | || | || || | ||| || | ||||||| |||| Sbjct 13636 GCCAAGTTCGAAGA-ATTGAATATGGAACTATTCAAAAAGACCTTGAAACCAGTGCAACA 13694 Query 552077 AGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTAC---ATGAAATTGTGCTTGTTGG 552133 ||| ||| ||| | ||| | ||| |||| | | | || ||||| | ||||| Sbjct 13695 AGTGTTAGATGATGCCAAGGTC---AAAGCCAATGAAATCGACGATATTGTTTTAGTTGG 13751 Query 552134 TGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT----AAGTTCTTATTTCAATGGTA 552189 ||| || || |||||||| || | | ||| |||| || ||||| |||||||| Sbjct 13752 TGGTTCCACCAGAATTCCAAAGGTGCAAGAATTGTTGGAGAAATTCTT----CAATGGTA 13807 Query 552190 AAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249 | || | | | || | || |||||||| |||||||| |||||||| || |||||| Sbjct 13808 AGAAGATTTCTAAGGGTATCAACCCAGATGAAGCTGTTGCATATGGTGCAGCTGTTCAAG 13867 Query 552250 CAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTA 552309 ||| | || | || ||| ||| | || ||||||| ||| | ||||||| Sbjct 13868 CAGGTGTTTTGAGCGG------TGAAGAAGGTGTGGAAGATATTGTTCTTATTGATGTTA 13921 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAA 552369 || || || | ||| | |||||| ||| ||| ||||||||| | | || | |||| Sbjct 13922 ACCCATTAACTTTAGGTATTGAAACAACTGGTGGTGTTATGACTACTTTGATTAAGAGAA 13981 Query 552370 ATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTG 552429 | ||| | || || || ||||| | | || || || |||||||||| || Sbjct 13982 ACACTCCAATCCCAACCAAGAAATCGCAGATTTTCTCCACTGCCGTTGATAATCAAAATG 14041 Query 552430 CTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG 552489 | ||| || ||||||| ||||| |||||| | | |||||| || |||| || | Sbjct 14042 CCGTTCTGATCCAAATTTACGAAGGTGAAAGAGCAATGGTTAAAGAYAACAATCTTCTAG 14101 Query 552490 GTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTA 552549 || || | ||| |||||| || |||||||| | ||| || ||||||||||| | Sbjct 14102 GTCAATTCGAATTATCAGGTATACCACCTGCTCCAAGAGGAACTCCACAAATTGAAGTGA 14161 Query 552550 CTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTT 552591 ||||| | ||| |||| || |||||||| || | ||||| Sbjct 14162 CTTTCACATTAGATTCCAACGGTATTTTGAAAGTCAGTGCTT 14203 Score = 172 bits (190), Expect = 4e-37 Identities = 373/551 (68%), Gaps = 13/551 (2%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| |||||||| || || ||| ||||||||||| | ||||||| || Sbjct 12757 ATTGGTATCGATTTAGGTACTACGTATTCATGTGTTGGTGTGATGAAAAATGGACGTGTG 12816 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 |||||| | || ||||||||||||||||||| ||||| || |||||| | ||||||||| Sbjct 12817 GAAATTCTGGCTAATGATCAAGGTAACAGAATCACTCCTTCGTATGTTGCATTCACGGAA 12876 Query 550115 ACT---GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 | | ||| || |||||||| || || ||| |||||||| || || ||| ||| Sbjct 12877 AATAACGAAAGATTGGTTGGTGACGCTGCTAAAAATCAAGCCGCTTCCAACCCTTTCAAC 12936 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || ||||||| || | || ||||| ||| || | |||| | |||| Sbjct 12937 ACCGTTTTTGACATCAAGAGATTGATTGGTCAAAGATTCAGTGATAAAATCATTCAAAAG 12996 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG-C 550290 || || ||||||| |||| | | || | | || | | ||| | |||| | Sbjct 12997 GAAATCAAGCATTTACCTTACAAGATCGCTGATAAGGAAGATAGACCAATCGTCGAAGTC 13056 Query 550291 TACTCATGAAGGATCTGTTAAACAATT--TTCAC--CAGAACAAATTTCATCTATGGTTT 550346 | | || || ||| || ||| | ||||| | ||| |||||||| | ||| ||| Sbjct 13057 GAAT-AT-AACGAT---GAAACCAAATCCTTCACAGCTGAAGAAATTTCAGCAATGATTT 13111 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | |||||||| | || | || | | ||| || | ||||| |||| || Sbjct 13112 TGGGTAAAATGAAGTCCATTGCTGAAGATTATTTAGGTAAAAAGGTTACCCATGCCGTTG 13171 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || || || ||||| ||||| | ||| | ||||| |||||||||||||| | Sbjct 13172 TCACAGTTCCTGCCTATTTCAATGATGCTCAAAGACAAGCAACTAAAGATGCTGGTACAA 13231 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||||| | | |||| | | ||| | |||||||| ||||| |||||| |||| |||| Sbjct 13232 TTGCTGGTTTGACTGTTTTAAGAATTGTGAATGAACCAACTGCAGCTGCAATTGCCTATG 13291 Query 550527 GACTTGATAAA 550537 | | |||||| Sbjct 13292 GTTTAGATAAA 13302 >seq1 Length=3254712 Score = 140 bits (154), Expect = 3e-27 Identities = 196/276 (71%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643 |||||| | |||| |||| || | ||||| |||||||| ||| ||||| ||||| Sbjct 377433 GATTGGAATGTTTCCAGAAACAGATACTGGGGTACTCCAATCCCATTATGGGTTTCTGAC 377492 Query 368644 GATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGTG 368703 ||| ||||||||||| ||| | ||||| || ||||| || | |||||||||||| Sbjct 377493 GATATGGAAGAAATTGTCTGTGTTGGTTCTATCGAAGAACTGAGAAAATTATCTGGTGAC 377552 Query 368704 CAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAAA 368763 | || | ||| | || | | ||||| || ||||| | |||||||| || | Sbjct 377553 GATTCCATCACCGATATTCACAGACACAAAATCGACCACATCACCATTCCATCTAAAATG 377612 Query 368764 GGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCT 368823 || || ||| ||| || |||||| ||||| ||||| ||||| || || |||||| Sbjct 377613 GGTAAGGGTCAATTRAAGAGAATTGAAGATGTTTTYGATTGTTGGTTCGAGTCTGGTTCT 377672 Query 368824 ATGCCTTATGGTCAAATACATTATCCATTTGATAAC 368859 ||||| || | | | ||||||||||||||| ||| Sbjct 377673 ATGCCATACGCTTCCAAACATTATCCATTTGAAAAC 377708 Score = 100 bits (110), Expect = 2e-15 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 390813 ACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCATC 390872 ||||| |||||||| | | ||||||| | | | || ||||||| |||||||| Sbjct 1708955 ACCATCTTCACCATAAATAAATTGAATGACATCACCTAAGGAATTTCTTGTAGTACCATC 1709014 Query 390873 ATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTGTC 390932 ||| | || | || || ||||| ||| | ||| |||||| || |||||||| || Sbjct 1709015 ATAGTGAACCATTATATCCTCTAAAGCTTTTAATAACCGTCTTTGAATGTAACCAGTTTC 1709074 Query 390933 TGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAAAA 390992 |||||||| | ||||| | ||| | ||||||||| |||||||| | ||||| || || Sbjct 1709075 MGCAGTTTTGACGGCAGTGTCAATTAAACCTTCTCTACCTGCCATCGCGTGGAAAAAGAA 1709134 Query 390993 TTC 390995 ||| Sbjct 1709135 TTC 1709137 Score = 89.7 bits (98), Expect = 4e-12 Identities = 229/344 (67%), Gaps = 7/344 (2%) Strand=Plus/Minus Query 428255 GTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGT 428314 ||||| ||||||||||| || | ||||||||| ||| ||||| |||||| Sbjct 677403 GTAAAAATATATCTTGCAGCCGCAGCATCTTTACCACCTTGAGCTCTAGAACCAAATCCA 677344 Query 428315 CCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACA 428374 |||| || ||||| | || | ||||||| || ||||||| ||| |||| | || | Sbjct 677343 CCATGTGGTATCAAAATGTTTAAATTATTAGAACCAACATAATCTTGAGCCAAACCAATA 677284 Query 428375 ATGGTACTAGTTAAGGATTGTTCACCATGATGATATTTAGTTCTTTTTGAAACTGCACCT 428434 || | | || || |||||||| ||||| || || |||| |||| Sbjct 677283 ATTGATTGCATCAATGACGCGTCACCATGRTGATAACCTGTATGTTCYGAAATATAACCT 677224 Query 428435 TGTAATTCTGATACCTTTATTTCTTCTTTATAAATACCTTCTTCTACTGATCC--ATAAA 428492 | ||||| || ||||| ||||| ||| | || ||| ||| || || | ||||| Sbjct 677223 TCTAATTGAGACACCTTAATTTCATCTCTCAAATTAC--GCTTGTA-ACATGCRTATAAA 677167 Query 428493 ATACTTTGCGTTGTGATGGTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTAT 428552 || |||| | ||| |||||| || |||||||| | | ||| ||||||||| | || Sbjct 677166 AT-CTTT-CTTTGAACTGGTTTAAAACCATCCATGACAGAAGGAATAGATCTTGCACAAT 677109 Query 428553 CATCCACTGAGAATGATATTAGTTCTTGATGAATGAAATCATAA 428596 | | | || || | |||| ||||| | ||||||||| || Sbjct 677108 CGGCAATAGAAAACAAGATTAATTCTTTGTTGATGAAATCAGAA 677065 >seq2 Length=1335671 Score = 111 bits (122), Expect = 1e-18 Identities = 151/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 563272 TGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTT 563329 |||||||| ||| ||||| || ||||| |||| || ||||| ||||| | || Sbjct 5041 TGAAGGGTGGATTCCTTTTGG--ATGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATT 4984 Query 563330 GTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTT 563389 | || || ||||| || | |||||| || ||||| ||||| ||||| || ||||| || | Sbjct 4983 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCT 4924 Query 563390 TTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCA 563448 |||| || || ||||| || || | || | | ||| || |||| || ||||| Sbjct 4923 TTTGCTTGACATTGTCAATGGTGTCGGAA-GATTCGACTTCAAGGGTAATGGTCTTACCG 4865 Query 563449 GTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| |||||||||||||||||||| Sbjct 4864 GTAAGGGTTTTAACGAAAATTTGCAT 4839 >seq5 Length=831479 Score = 86.0 bits (94), Expect = 5e-11 Identities = 135/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || ||||| || | || ||||| ||||| | ||| || || || || || Sbjct 265631 TTTGG--ATGTTGTAGTCGGATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGAT 265574 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 | |||||| || ||||| || || ||||| |||||||| || ||||| || || || Sbjct 265573 CAATCTTTGTTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTC 265514 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 ||| ||||||| || | | ||| | ||| | || |||||||| | || || || | Sbjct 265513 AATGGTATCAGAA-GATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAA 265455 Query 563465 AAATTTGCAT 563474 |||||||||| Sbjct 265454 AAATTTGCAT 265445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029294043273130