Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq5 244 1e-59 >seq5 Length=831479 Score = 244 bits (270), Expect = 1e-59 Identities = 579/865 (67%), Gaps = 15/865 (2%) Strand=Plus/Minus Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966 |||| || || || ||||| || ||| || || |||||||| |||||||| ||||| | Sbjct 305261 TTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAAGGATTTG 305202 Query 36967 --ATGTATTATATATAGT-ACTAC-ATGATAATTCCTTCAGAAGCCTATCCGCAACAAAT 37022 | || ||| | | || || || | || || ||||| || || ||||||||| Sbjct 305201 TGACGTTGTATCTCTTGTCACAACCAAGAGAAACA----AGAAGTCTGTCGGCAACAAAT 305146 Query 37023 TCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT 37082 || | |||| |||||| | || | ||| ||||||| || || |||||| || ||| Sbjct 305145 TCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGCGTCT 305086 Query 37083 -TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA-CAATAACTTCTT 37140 |||| | || || ||| ||| ||||| |||| | || || | || | ||| Sbjct 305085 GTGAA-ATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCTTGGA 305027 Query 37141 CAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTT 37200 | ||||| || || |||| || |||||||| |||||||| |||||||||| Sbjct 305026 -ATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAAACCTT 304968 Query 37201 CATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAA 37260 ||||||| | || ||||| || ||||| || || |||||||| |||||||||||||| | Sbjct 304967 CATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTTTTTCA 304908 Query 37261 TCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTA 37320 ||| || || | ||||| ||||| || || || ||||||||||| || ||||| || | Sbjct 304907 ACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAAGGCAA 304848 Query 37321 CAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCT 37380 | | | | |||||| || | | | ||| | |||||| | | | ||| || |||| Sbjct 304847 CTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTCGGCCT 304788 Query 37381 TTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTAT 37440 || ||||| |||| ||| ||||||| || || || | || | ||| | || Sbjct 304787 TTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTCCTTTGGAT 304728 Query 37441 CTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTA 37500 | | | ||| || ||||| | ||| || |||| || || || ||||| || | Sbjct 304727 CCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTCCATCATGA 304668 Query 37501 TCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAG 37560 | || |||||||| |||||| | ||||||| | ||| || || | || | | | Sbjct 304667 TTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAAGTTTTCAA 304608 Query 37561 CTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAA 37620 | || ||||| || || || ||||| ||| ||||| || || | || | || | Sbjct 304607 CCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCTGGTAATGA 304548 Query 37621 AATGTCTTTC---ATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAA 37677 || |||||| ||||||| | || ||||| || | | || || || || |||| Sbjct 304547 AAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGACAAGTCAA 304488 Query 37678 CTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTAT 37737 ||| || ||||||| ||| || || ||| ||||| ||| || |||| | Sbjct 304487 TTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGATTTCATGGT 304428 Query 37738 GTTGTATTGGAAATATTACAAATCT 37762 || ||||| || | |||||||| Sbjct 304427 ATTTGATTGGGAAGAGCACAAATCT 304403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316526053480