Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq5 244 1e-59
>seq5
Length=831479
Score = 244 bits (270), Expect = 1e-59
Identities = 579/865 (67%), Gaps = 15/865 (2%)
Strand=Plus/Minus
Query 36907 TTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCCATAAAATCAAATGGATTAG 36966
|||| || || || ||||| || ||| || || |||||||| |||||||| ||||| |
Sbjct 305261 TTTCAAAGAAGTTGGTCTTACCAGCTAAAGAGATGTTTTCCATGAAATCAAAAGGATTTG 305202
Query 36967 --ATGTATTATATATAGT-ACTAC-ATGATAATTCCTTCAGAAGCCTATCCGCAACAAAT 37022
| || ||| | | || || || | || || ||||| || || |||||||||
Sbjct 305201 TGACGTTGTATCTCTTGTCACAACCAAGAGAAACA----AGAAGTCTGTCGGCAACAAAT 305146
Query 37023 TCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCT 37082
|| | |||| |||||| | || | ||| ||||||| || || |||||| || |||
Sbjct 305145 TCGACATATTGACACATCAAATCTTTGTTCATACCAAGTAAGTTGGCTGGAAGAGCGTCT 305086
Query 37083 -TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTAA-CAATAACTTCTT 37140
|||| | || || ||| ||| ||||| |||| | || || | || | |||
Sbjct 305085 GTGAA-ATATCTTTGTTCAATTTCAACAGCTTCTTCGATGATCTTGAGCACGATCTTGGA 305027
Query 37141 CAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTT 37200
| ||||| || || |||| || |||||||| |||||||| ||||||||||
Sbjct 305026 -ATCTGGGGTATTGTTCAAATGGGAGAATAATAAACAAGCAAAATCGGTGTGTAAACCTT 304968
Query 37201 CATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAA 37260
||||||| | || ||||| || ||||| || || |||||||| |||||||||||||| |
Sbjct 304967 CATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCTGGCATCAAACCTCTTTTTTTCA 304908
Query 37261 TCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTA 37320
||| || || | ||||| ||||| || || || ||||||||||| || ||||| || |
Sbjct 304907 ACCAGAAAATGGAAGCAAACGATCCGGAGAAAAAGATACCTTCAACAGCGGCAAAGGCAA 304848
Query 37321 CAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCT 37380
| | | | |||||| || | | | ||| | |||||| | | | ||| || ||||
Sbjct 304847 CTAATCTTTCACCGAATAATGCATTTTCATCGCACATCCATCTCATGGCCCAGTCGGCCT 304788
Query 37381 TTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTAT 37440
|| ||||| |||| ||| ||||||| || || || | || | ||| | ||
Sbjct 304787 TTTCTTTAATACATGGAATGTTTTCAATGGCATTGAATAAGAATTCCGATTCCTTTGGAT 304728
Query 37441 CTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTA 37500
| | | ||| || ||||| | ||| || |||| || || || ||||| || |
Sbjct 304727 CCTTGACATAGGTGTCAATCAATAAGGAGTATGTTTCCGAATGGATGTTTTCCATCATGA 304668
Query 37501 TCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAG 37560
| || |||||||| |||||| | ||||||| | ||| || || | || | | |
Sbjct 304667 TTTGGAAACCATAGAAACACTTGGCTTCAGGGATTTGCACCTCAGCCGAGAAGTTTTCAA 304608
Query 37561 CTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAA 37620
| || ||||| || || || ||||| ||| ||||| || || | || | || |
Sbjct 304607 CCAAATTTTCGTTGACAATACCATCTGAAGCAGCAAAAAAGGCCAACACTCTGGTAATGA 304548
Query 37621 AATGTCTTTC---ATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAA 37677
|| |||||| ||||||| | || ||||| || | | || || || || ||||
Sbjct 304547 AAAATCTTTCGTTATCATTTAGTCTGTTGTTCCAGTCGTGTAAGTCCTTAGACAAGTCAA 304488
Query 37678 CTTCATCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTAT 37737
||| || ||||||| ||| || || ||| ||||| ||| || |||| |
Sbjct 304487 TTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCTTTTTGTACATTTGCCAGATTTCATGGT 304428
Query 37738 GTTGTATTGGAAATATTACAAATCT 37762
|| ||||| || | ||||||||
Sbjct 304427 ATTTGATTGGGAAGAGCACAAATCT 304403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592316526053480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |