Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4 201 6e-47
seq3 154 7e-33
>seq4
Length=942658
Score = 201 bits (222), Expect = 6e-47
Identities = 427/626 (68%), Gaps = 21/626 (3%)
Strand=Plus/Minus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
|||||| ||| ||| |||||||| | |||||| | |||| || |||||||| |||||
Sbjct 333399 TCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATCTCTTGCTCTG 333340
Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041
|||||||| || || || || ||| | | || | || || |||||||||| |||||||
Sbjct 333339 ATTTCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCAT 333280
Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101
|| || | ||| | |||||| ||| |||||| ||||||||||| || |||||
Sbjct 333279 GGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCGACATATCTA 333220
Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCT 26160
|| || | || || ||| | | |||||||| | || | |||| | | ||||| || |
Sbjct 333219 GCGGTATTGTTAAACACTCTAACCATTGGAA-TGATACCGTTGGATGTACCGTTGGTACC 333161
Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220
||| | || || ||||||||||||| |||| || | ||| || ||||||||
Sbjct 333160 TGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACCACCAGCAGT 333101
Query 26221 TTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTT 26280
|| ||||| ||||| | | | ||||| |||| |||| || |||| |||
Sbjct 333100 CTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGAATCATCTTG 333041
Query 26281 CATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTT---GTTCCTGAATTAAATAA 26337
||| | | ||| ||||||||||| | ||| || || || || | |||||| ||
Sbjct 333040 CATAGCAACTAAGAAACAAGAAGACATTTG---ATTTCTTGGGGTACCAGCATTAAACAA 332984
Query 26338 TGTCGGTGTAGCATGAGTATAATATCCTTCACTCA-AAGCTGTATAAGTTTCA--AGAAC 26394
|| || | |||||| ||| | |||| || | || || | |||| |||||| || ||
Sbjct 332983 AGTTGGAGAAGCATGGGTAAAGTATCTTTTAGACATTAGAT-TATAGGTTTCAATAGCAC 332925
Query 26395 TTCATCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAACCACATATATTGAGGTCG 26454
|| | |||| | | | || ||| ||| ||| | || || |||||||
Sbjct 332924 TT--TGTATATCATCACCATGAATACCAACAGCAACTCTCATAATCAAATGCTGAGGTCT 332867
Query 26455 TTCAATTACATTATTTTCCGCATC--TCTAATCAAATAAGATTTTTCTAAAGTTTTCAAT 26512
||| | || |||| | || ||| | |||||||||| |||| || ||||| ||
Sbjct 332866 TTC---TGCA--ATTTGACCATTCAATCTCAACAAATAAGATCTTTCCAACGTTTTGAAA 332812
Query 26513 CCAAAATAATCATGATTGAAATCTCT 26538
|||||||| | | |||||||||||
Sbjct 332811 CCAAAATAGTTGTAGTTGAAATCTCT 332786
Score = 114 bits (126), Expect = 7e-21
Identities = 119/154 (77%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 25028 AAAACTCTTCTT--ATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTA 25085
||||||||||| || ||| || || ||| ||||||||||||||||||| | || |
Sbjct 334269 AAAACTCTTCTGGAATAAATA--TTAGAGGTGTATGGTTCAAAACATTCATTGTAACCCA 334212
Query 25086 AGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCAT 25145
| ||||||||||| || || ||||||||| ||| | ||||| || ||||||||||||
Sbjct 334211 AAATTTGAGAAGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACCAA 334152
Query 25146 ATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
| || ||||| || |||||| |||||||||
Sbjct 334151 ACTTGGAAATCTTTTCCTTTAATCCATCCCAATC 334118
>seq3
Length=1238071
Score = 154 bits (170), Expect = 7e-33
Identities = 180/244 (74%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957
|||||| ||||| | ||| || ||||| | ||| || ||||| || ||||| | |
Sbjct 367306 AATAAACACCAATAATCATCGCTTTCCACTTTTTTCATGAACAAATCGGGTATCCATAGT 367247
Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017
||| ||||| ||||| || || || |||| | || ||||| ||| | |||| ||
Sbjct 367246 GCAAGAAATAGGTCTCTTGCCCTTCTTGCTTCATCACCRTGATTTTTTCTAAGATTCAAA 367187
Query 26018 AAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTT 26077
|||||||||| ||| | ||||| ||||||||||| ||| |||| ||| ||||||
Sbjct 367186 AAATCAAAAACATCCGCATGCCAAGGTTCTAAATATATACAAAAAGCACCAGGTCTTTTA 367127
Query 26078 CCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT 26137
||| ||||| || || |||||||||||| |||||| |||||||||| ||||| ||
Sbjct 367126 TTTCCTCCTTGGTCAACATATCTTGCAGTTGAATTGAATACTTTCAACAGAGGAACCAAA 367067
Query 26138 CCAG 26141
||||
Sbjct 367066 CCAG 367063
Score = 141 bits (156), Expect = 5e-29
Identities = 329/483 (68%), Gaps = 14/483 (3%)
Strand=Plus/Minus
Query 24704 TAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTT 24763
||||||||||| ||||||||| || ||||| ||||||||||||| || |||||
Sbjct 368464 TAATACATTCCTGTTTTCAATCCTTTTTTCCAGGCGTAAAAATGCATGCTGGTAAGTTTG 368405
Query 24764 GCAA-TGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTG 24822
| || ||| | ||| | |||||||||||| ||| | ||| ||||| |
Sbjct 368404 GAAAATGTGATATCTTTC-ATAAACAAGTTCATACTTTGTGATTGATCCACAAATGGGCC 368346
Query 24823 TCTATCTGCAGCTAAGTCAATGATCG--TTTTCATCGATATATCGTAAGCTGTTTTGTAT 24880
|||||| || ||||| || || || |||| | || || || | | ||||||||
Sbjct 368345 TCTATCAGCTGCTAAATCTATAATGTGCTTTTGA--GAGATTTCCCACACWGTTTTGTAA 368288
Query 24881 CTCTCTTTTATC-TCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAA 24939
|| || | ||| | ||||| | |||||||||||||| || | | | ||||
Sbjct 368287 AGA-CTCCTAACATCACTAGGAATCTGATCTATATTTTGAACTGAACCGTCATGT-TCAA 368230
Query 24940 TAGATTCAATCT--CATATTCGGTGT-CCAAAGATTAATTTTTTCAAGATCTCTAATCAA 24996
| |||| ||| | || | ||| || ||| | | | | | |||| ||| |||
Sbjct 368229 T-GATTAAATTTTTCA-AGTCGCTGGACCATAAACCCAAATCACATAAATCTTTAACCAA 368172
Query 24997 GTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGT 25056
| |||||| | | ||||| || || ||||| ||||| || ||| |||||| ||
Sbjct 368171 ATATTTATTCACAACCTGGAATTCGCCTGATAAAACCCTTCTAATGAATATGTTTGAGGT 368112
Query 25057 GAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAA 25116
| |||||||||||||||||| ||||||||| || ||| | || || || ||||| ||
Sbjct 368111 AATTGGTTCAAAACATTCATTGAATCCTAAGATCTGTGAACTGGACGCAGTGGGCATCAA 368052
Query 25117 TGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCA 25176
|| | || || ||||| | | ||| |||||| |||| |||| ||| || ||||||
Sbjct 368051 AGCAACCAAAAGGGAATTACGTACACCGTATTTACCAATATCTTTTTTCAAGGAATCCCA 367992
Query 25177 ATC 25179
|||
Sbjct 367991 ATC 367989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039885894775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |