Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq12 123 3e-23
>seq12
Length=158202
Score = 123 bits (136), Expect = 3e-23
Identities = 197/280 (70%), Gaps = 2/280 (1%)
Strand=Plus/Minus
Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322
|||||| ||| || || | |||||| ||| || || || | ||||||||| ||
Sbjct 13623 CCATCTAAACCGTGGTAAACCGCATAGTTAGCAGCAATGTTGGCCAACAGTGCTTGCGCA 13564
Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382
|| || ||||| ||||||||| |||||| ||||||| || ||||||||||||| ||
Sbjct 13563 GTACAAATGTTGGAGGTTGCTTTCTCTCTTTTAATATGTTGTTCTCTAGTTTGTAACGCC 13504
Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442
||||| || || || || | ||| || ||| | |||||| || || ||
Sbjct 13503 AATCTTAGAGCTGGCTTACCATTAGAGTCTTTTGTGATACCAATAATTCTACCTGGGATT 13444
Query 139443 TTTCTCTTATACTTGTCTGTTG-TTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCAT 139501
||||| ||| | | || || |||||||| |||||||| ||||| || || |||||
Sbjct 13443 TTTCT-GGATAATGGCTTGCTGACAGCAAAGAAAGCAGCATGCGGACCACCATAACCCAT 13385
Query 139502 AGGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541
|||| |||||| ||||| | ||||| | ||| ||||
Sbjct 13384 TGGAACACCAAATCTTTGGGAAGAACCTAGAACAACATCA 13345
Score = 105 bits (116), Expect = 8e-18
Identities = 253/383 (66%), Gaps = 0/383 (0%)
Strand=Plus/Minus
Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230
|| |||| ||| |||| || ||||| || || ||||| ||||| || || ||||||
Sbjct 14739 AGGTGTTCTGCAACACAGATTGGACCAACACCTGGACCACCACCACCGTGAGGAATAGCA 14680
Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290
|| ||||| || | ||| | ||||| || || || || | |||| ||| | | |
Sbjct 14679 AAAGTCTTGTGCAGATTCAAGTGACAGACGTCGGCTCCTAAATCACCTGGAGAGGTCAAA 14620
Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350
|| || || ||||| | ||| |||||||| | ||| || ||||| |||| | ||||||
Sbjct 14619 CCAACTTGAGCATTCATATTGGCACCATCTAAATACACTTGACCCCCATATTTATGAACA 14560
Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410
||| ||| | | || ||| |||||| | || | || ||||||||||| | |
Sbjct 14559 ATCGAACAGGCATCCTTAATAGTTGGTTCAAACAACCCGTAGGTGGATGGATATGTCACC 14500
Query 138411 ATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCT 138470
|| || | | || | | || | | | |||| ||||| ||| | | ||||
Sbjct 14499 ATCATTGCGGCCAATTTATCAGCATACTTTTTGGCTTGTAACTCTAAATCCTCCAAGTCT 14440
Query 138471 ATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTA 138530
| ||| |||| |||||||||| | || |||| || |||||| ||
Sbjct 14439 AAGTTACCATTTGTTAGACACTTGACAGGAATGACCTTCAAACCAGCCATGGTAGCGGAT 14380
Query 138531 GCAGGATTAGTTCCATGTGCTGA 138553
|| || ||||| |||||||||||
Sbjct 14379 GCTGGGTTAGTACCATGTGCTGA 14357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998132213240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |