Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq12 123 3e-23 >seq12 Length=158202 Score = 123 bits (136), Expect = 3e-23 Identities = 197/280 (70%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 |||||| ||| || || | |||||| ||| || || || | ||||||||| || Sbjct 13623 CCATCTAAACCGTGGTAAACCGCATAGTTAGCAGCAATGTTGGCCAACAGTGCTTGCGCA 13564 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || ||||| ||||||||| |||||| ||||||| || ||||||||||||| || Sbjct 13563 GTACAAATGTTGGAGGTTGCTTTCTCTCTTTTAATATGTTGTTCTCTAGTTTGTAACGCC 13504 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 ||||| || || || || | ||| || ||| | |||||| || || || Sbjct 13503 AATCTTAGAGCTGGCTTACCATTAGAGTCTTTTGTGATACCAATAATTCTACCTGGGATT 13444 Query 139443 TTTCTCTTATACTTGTCTGTTG-TTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCAT 139501 ||||| ||| | | || || |||||||| |||||||| ||||| || || ||||| Sbjct 13443 TTTCT-GGATAATGGCTTGCTGACAGCAAAGAAAGCAGCATGCGGACCACCATAACCCAT 13385 Query 139502 AGGAATACCAAACCTTTGCATACTACCTACAGCAATATCA 139541 |||| |||||| ||||| | ||||| | ||| |||| Sbjct 13384 TGGAACACCAAATCTTTGGGAAGAACCTAGAACAACATCA 13345 Score = 105 bits (116), Expect = 8e-18 Identities = 253/383 (66%), Gaps = 0/383 (0%) Strand=Plus/Minus Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230 || |||| ||| |||| || ||||| || || ||||| ||||| || || |||||| Sbjct 14739 AGGTGTTCTGCAACACAGATTGGACCAACACCTGGACCACCACCACCGTGAGGAATAGCA 14680 Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290 || ||||| || | ||| | ||||| || || || || | |||| ||| | | | Sbjct 14679 AAAGTCTTGTGCAGATTCAAGTGACAGACGTCGGCTCCTAAATCACCTGGAGAGGTCAAA 14620 Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350 || || || ||||| | ||| |||||||| | ||| || ||||| |||| | |||||| Sbjct 14619 CCAACTTGAGCATTCATATTGGCACCATCTAAATACACTTGACCCCCATATTTATGAACA 14560 Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 ||| ||| | | || ||| |||||| | || | || ||||||||||| | | Sbjct 14559 ATCGAACAGGCATCCTTAATAGTTGGTTCAAACAACCCGTAGGTGGATGGATATGTCACC 14500 Query 138411 ATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCT 138470 || || | | || | | || | | | |||| ||||| ||| | | |||| Sbjct 14499 ATCATTGCGGCCAATTTATCAGCATACTTTTTGGCTTGTAACTCTAAATCCTCCAAGTCT 14440 Query 138471 ATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTA 138530 | ||| |||| |||||||||| | || |||| || |||||| || Sbjct 14439 AAGTTACCATTTGTTAGACACTTGACAGGAATGACCTTCAAACCAGCCATGGTAGCGGAT 14380 Query 138531 GCAGGATTAGTTCCATGTGCTGA 138553 || || ||||| ||||||||||| Sbjct 14379 GCTGGGTTAGTACCATGTGCTGA 14357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998132213240