Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 244 1e-59 seq1 82.4 9e-11 >seq4 Length=942658 Score = 244 bits (270), Expect = 1e-59 Identities = 1044/1631 (64%), Gaps = 39/1631 (2%) Strand=Plus/Plus Query 75320 CCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCC 75379 ||||| | || ||||||||||| |||||| || ||||| ||| ||| | | || Sbjct 332978 CCAACTTTGTTTAATGCTGGTACCCCAAGAAATCAAATGTCTTCTTGTTTCTTAGTTGCT 333037 Query 75380 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 75439 | | || || || || | ||||| |||| || | | | ||||| | || || Sbjct 333038 ATGCAAGATGATTCTATTGAAGGTATTTATGATACCTTAAAACAATGTGCTCTGATTTCC 333097 Query 75440 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 75499 ||| ||||| |||||||| | ||||| || || | ||| | | ||| |||| Sbjct 333098 AAGACTGCTGGTGGTATTGGTTTACACATTCACAATATTAGATCGACCGGTTCTTATATT 333157 Query 75500 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 75559 || || || ||| ||| | ||||| ||||||||| || | || |||||| || Sbjct 333158 GCAGGTACCAACGGTACATCCAACGGTATCATTCCAATGGTTAGAGTGTTTAACAATACC 333217 Query 75560 GCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGA 75615 || | ||||| |||||| | || | ||| ||| || | || | || | || Sbjct 333218 GCTAGATATGTCGATCAAG-GTGGTAACAAAAGACCTGGTGCCTTTGCTTTATATCTCGA 333276 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 |||||||| || ||||| | || || |||| | || ||||| ||| | ||||| Sbjct 333277 GCCATGGCACGCAGATATTTTAGACTTTATTGACATTAGAAAAAACCATGGTAAGGAAGA 333336 Query 75676 GGCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734 || | | | ||||| | || | | | |||||| | || | ||||||||| | | Sbjct 333337 AA-TCAGAGCAAGAGATTTGTTCCCTGCATTATGGATTTCTGATTTATTCATGAAGAGAG 333395 Query 75735 TTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACG 75794 |||| | | ||||| ||||||| | ||| | || |||||| | || | Sbjct 333396 TTGAAAACAATCAAGAATGGACTCTTTTTTCACCAAGTGAAGCCCCAGGTTTGAGTGATG 333455 Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATG 75854 ||||| || || |||| | ||| ||| |||||| | || ||||||| | Sbjct 333456 TTTATGGTGATGAATTCGAAGAATTATACGAAAAATATGAAAAAGAAGGTAGAGGTAGAT 333515 Query 75855 CGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 | || | | || | | | || ||| | ||||| | || ||||||| || || || Sbjct 333516 CCACCAT-CAAGGCTCAAAAATTATGGTACTCTATTTTGGAAGCACAGACAGAAACCGGT 333574 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 ||||||| |||||||| |||||||| || |||| ||| |||||| |||| ||||| Sbjct 333575 ACACCATTCATGCTTTATAAGGATGCATGCAACAGGAAATCCAACCAACAGAACTTGGGT 333634 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 | ||||| || ||||| || || ||| | || ||| | || || Sbjct 333635 ATGATCAAATCTTCTAATCTGTGTTGTGAGATTGTTGAATACTCTTCCCCAGAAGAAGTT 333694 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA---TGAAGAGA-CTCG 76089 |||||||| || || |||||| | || | ||| | ||| | ||| || | ||| Sbjct 333695 GCTGTTTGTAACTTAGCATCAGTTGCATTACCAGCATTTGTTGAAAGTGATGAAAACTCA 333754 Query 76090 CACT--TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147 | | | | | ||| ||| | |||||||| || || ||||| |||| ||| | || Sbjct 333755 TCGTGGTATAACTTTGAGAAATTACATGAAATAACCAAAGTTGTTGCCAAGAATTTGAAT 333814 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACAC 76207 |||| |||||||| | |||||| ||||| || ||| || || ||| || || Sbjct 333815 AAGATCATCGACAGAAACTATTATCCGGTTGAAGAAGCTAGAAGATCCAACATGAGAAAC 333874 Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA 76267 ||||| |||| | | || ||||||||| | || |||| || || ||| | | || Sbjct 333875 AGACCAATTGCTGTTGGGGTTCAAGGTTTAGCTGATGCCTTCATGATGTTAAGATTGCCA 333934 Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327 |||||||| | | || | || | || | || |||||||| || || ||||| Sbjct 333935 TTTGATTCTGCCCAGGCTAGAGAACTAAACATACAAATTTTTGAAACTATATACCACGCT 333994 Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387 || |||| || ||| ||| |||| ||| | ||| | ||||| || | || || Sbjct 333995 TCATTGGAAGCTAGTATTGAGCTGGCCAAAGTTGACGGTCCATATGAAACCTACGAAGGC 334054 Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGT--GAAACCAAGCT-C 76444 ||||| || ||||| | | || |||||| |||||| || ||| |||| | | Sbjct 334055 TCTCCAGCAAGTCAAGGTTTATTACAATTTGATTTGTGGG---GTAAGAAGCCAACCGAC 334111 Query 76445 AACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504 | || ||||||| | |||||| || || ||| | | ||| | | Sbjct 334112 TTATGGGATTGGGATGGATTAAAGGAAAAGATTTCCAAGTTTGGTTTGAGAAACTCTTTA 334171 Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564 || | |||||||||||||| |||||||| | ||||| |||||| | |||||||| ||| Sbjct 334172 TTAGTTGCACCAATGCCAACTGCCTCCACTTCTCAAATTTTGGGTTACAATGAATGTTTT 334231 Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624 ||||||||||| | || || || |||||| | || |||||||| ||||| Sbjct 334232 GAACCATACACCTCTAATATTTATTCCAGAAGAGTTTTAGCCGGTGAGTTCCAGATTGTT 334291 Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGAT---ATGAAG 76681 ||| || | | | ||| | | || || | ||| || ||| |||||| Sbjct 334292 AACCCTTACATGTTGAGAGACTTGGTTGATATGGGATTATGG---AACGATTCCATGAAG 334348 Query 76682 GATCTCA----TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGA 76737 | | || | ||| | |||| || |||||||| | | | || ||| | || Sbjct 334349 AACCACATTATTTCTGACAACGGG----TCGATTCAAAACTTGCCTAACATTCCACAAGA 334404 Query 76738 TATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGC 76797 |||||| || ||||| ||||| ||||||||| | || | | || || ||||| Sbjct 334405 AATCAAGGATATCTACAAGACAGTTTGGGAAATCTCGCAAAAGTCTATTATCGATATGGC 334464 Query 76798 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAG--T 76855 || || | ||| || |||||||||| |||||||||||| ||||| |||| Sbjct 334465 TGCCGACAGAGGTGCCTACATTGATCAATCTCAAAGTATGAA--CATTCACCTAAAGAAC 334522 Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915 || || ||| || || | || |||||| | || | ||||| |||| | || || Sbjct 334523 CCTACCATGGGTAAACTGACATCGATGCATTTCTATGGATGGAAGAAGGGATTGAAGACT 334582 Query 76916 GGAATGTACTA 76926 || ||||| || Sbjct 334583 GGTATGTATTA 334593 >seq1 Length=3254712 Score = 82.4 bits (90), Expect = 9e-11 Identities = 212/318 (67%), Gaps = 5/318 (2%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||| || || |||| ||| || | ||| |||||||| || || || | Sbjct 1072277 GGTGCCAAAATTCCAAGAGGTGCCATTTTGAATGGTCCACCAGGTACTGGTAAAACATTA 1072336 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 | ||| ||||| ||| |||||| | || ||||| | | ||| |||| | | Sbjct 1072337 TTAGCCAAAGCCACCGCAGGTGAAGCTGGAGTTCCATTTTACTCTGTG-TCTGGTTCCGA 1072395 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||||| || |||||||||||||||||||| ||| || || ||| | || ||| || Sbjct 1072396 ATTTGTCGAAATGTTTGTTGGTGTGGGTGCATCAAGAGTGCGTGATTTGTTCAAAACTGC 1072455 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG--CA- 175511 | | |||||| || | ||||| || ||||||| || ||||| | || ||| || Sbjct 1072456 CAGAGAAAATGCTCCTTCGATTGTTTTTGTTGATGAAATAGATGCAATCGGAAAGTCCAG 1072515 Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 | | | | | || ||| || |||||||| |||||| | || | || ||| || | Sbjct 1072516 AGGTAAAGGTAAGGGAATGGGAGGTAATGACGAAAGAGAAAACACCCTGAACCAATTATT 1072575 Query 175572 CACCGAGATGGATGGCTT 175589 || |||||||| || Sbjct 1072576 AGTTGAAATGGATGGATT 1072593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569324086560