Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4 244 1e-59
seq1 82.4 9e-11
>seq4
Length=942658
Score = 244 bits (270), Expect = 1e-59
Identities = 1044/1631 (64%), Gaps = 39/1631 (2%)
Strand=Plus/Plus
Query 75320 CCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCC 75379
||||| | || ||||||||||| |||||| || ||||| ||| ||| | | ||
Sbjct 332978 CCAACTTTGTTTAATGCTGGTACCCCAAGAAATCAAATGTCTTCTTGTTTCTTAGTTGCT 333037
Query 75380 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 75439
| | || || || || | ||||| |||| || | | | ||||| | || ||
Sbjct 333038 ATGCAAGATGATTCTATTGAAGGTATTTATGATACCTTAAAACAATGTGCTCTGATTTCC 333097
Query 75440 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 75499
||| ||||| |||||||| | ||||| || || | ||| | | ||| ||||
Sbjct 333098 AAGACTGCTGGTGGTATTGGTTTACACATTCACAATATTAGATCGACCGGTTCTTATATT 333157
Query 75500 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 75559
|| || || ||| ||| | ||||| ||||||||| || | || |||||| ||
Sbjct 333158 GCAGGTACCAACGGTACATCCAACGGTATCATTCCAATGGTTAGAGTGTTTAACAATACC 333217
Query 75560 GCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGA 75615
|| | ||||| |||||| | || | ||| ||| || | || | || | ||
Sbjct 333218 GCTAGATATGTCGATCAAG-GTGGTAACAAAAGACCTGGTGCCTTTGCTTTATATCTCGA 333276
Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675
|||||||| || ||||| | || || |||| | || ||||| ||| | |||||
Sbjct 333277 GCCATGGCACGCAGATATTTTAGACTTTATTGACATTAGAAAAAACCATGGTAAGGAAGA 333336
Query 75676 GGCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734
|| | | | ||||| | || | | | |||||| | || | ||||||||| | |
Sbjct 333337 AA-TCAGAGCAAGAGATTTGTTCCCTGCATTATGGATTTCTGATTTATTCATGAAGAGAG 333395
Query 75735 TTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACG 75794
|||| | | ||||| ||||||| | ||| | || |||||| | || |
Sbjct 333396 TTGAAAACAATCAAGAATGGACTCTTTTTTCACCAAGTGAAGCCCCAGGTTTGAGTGATG 333455
Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATG 75854
||||| || || |||| | ||| ||| |||||| | || ||||||| |
Sbjct 333456 TTTATGGTGATGAATTCGAAGAATTATACGAAAAATATGAAAAAGAAGGTAGAGGTAGAT 333515
Query 75855 CGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
| || | | || | | | || ||| | ||||| | || ||||||| || || ||
Sbjct 333516 CCACCAT-CAAGGCTCAAAAATTATGGTACTCTATTTTGGAAGCACAGACAGAAACCGGT 333574
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
||||||| |||||||| |||||||| || |||| ||| |||||| |||| |||||
Sbjct 333575 ACACCATTCATGCTTTATAAGGATGCATGCAACAGGAAATCCAACCAACAGAACTTGGGT 333634
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
| ||||| || ||||| || || ||| | || ||| | || ||
Sbjct 333635 ATGATCAAATCTTCTAATCTGTGTTGTGAGATTGTTGAATACTCTTCCCCAGAAGAAGTT 333694
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA---TGAAGAGA-CTCG 76089
|||||||| || || |||||| | || | ||| | ||| | ||| || | |||
Sbjct 333695 GCTGTTTGTAACTTAGCATCAGTTGCATTACCAGCATTTGTTGAAAGTGATGAAAACTCA 333754
Query 76090 CACT--TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147
| | | | | ||| ||| | |||||||| || || ||||| |||| ||| | ||
Sbjct 333755 TCGTGGTATAACTTTGAGAAATTACATGAAATAACCAAAGTTGTTGCCAAGAATTTGAAT 333814
Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACAC 76207
|||| |||||||| | |||||| ||||| || ||| || || ||| || ||
Sbjct 333815 AAGATCATCGACAGAAACTATTATCCGGTTGAAGAAGCTAGAAGATCCAACATGAGAAAC 333874
Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA 76267
||||| |||| | | || ||||||||| | || |||| || || ||| | | ||
Sbjct 333875 AGACCAATTGCTGTTGGGGTTCAAGGTTTAGCTGATGCCTTCATGATGTTAAGATTGCCA 333934
Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327
|||||||| | | || | || | || | || |||||||| || || |||||
Sbjct 333935 TTTGATTCTGCCCAGGCTAGAGAACTAAACATACAAATTTTTGAAACTATATACCACGCT 333994
Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387
|| |||| || ||| ||| |||| ||| | ||| | ||||| || | || ||
Sbjct 333995 TCATTGGAAGCTAGTATTGAGCTGGCCAAAGTTGACGGTCCATATGAAACCTACGAAGGC 334054
Query 76388 TCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGT--GAAACCAAGCT-C 76444
||||| || ||||| | | || |||||| |||||| || ||| |||| | |
Sbjct 334055 TCTCCAGCAAGTCAAGGTTTATTACAATTTGATTTGTGGG---GTAAGAAGCCAACCGAC 334111
Query 76445 AACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 76504
| || ||||||| | |||||| || || ||| | | ||| | |
Sbjct 334112 TTATGGGATTGGGATGGATTAAAGGAAAAGATTTCCAAGTTTGGTTTGAGAAACTCTTTA 334171
Query 76505 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 76564
|| | |||||||||||||| |||||||| | ||||| |||||| | |||||||| |||
Sbjct 334172 TTAGTTGCACCAATGCCAACTGCCTCCACTTCTCAAATTTTGGGTTACAATGAATGTTTT 334231
Query 76565 GAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTC 76624
||||||||||| | || || || |||||| | || |||||||| |||||
Sbjct 334232 GAACCATACACCTCTAATATTTATTCCAGAAGAGTTTTAGCCGGTGAGTTCCAGATTGTT 334291
Query 76625 AACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGAT---ATGAAG 76681
||| || | | | ||| | | || || | ||| || ||| ||||||
Sbjct 334292 AACCCTTACATGTTGAGAGACTTGGTTGATATGGGATTATGG---AACGATTCCATGAAG 334348
Query 76682 GATCTCA----TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGA 76737
| | || | ||| | |||| || |||||||| | | | || ||| | ||
Sbjct 334349 AACCACATTATTTCTGACAACGGG----TCGATTCAAAACTTGCCTAACATTCCACAAGA 334404
Query 76738 TATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGC 76797
|||||| || ||||| ||||| ||||||||| | || | | || || |||||
Sbjct 334405 AATCAAGGATATCTACAAGACAGTTTGGGAAATCTCGCAAAAGTCTATTATCGATATGGC 334464
Query 76798 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAG--T 76855
|| || | ||| || |||||||||| |||||||||||| ||||| ||||
Sbjct 334465 TGCCGACAGAGGTGCCTACATTGATCAATCTCAAAGTATGAA--CATTCACCTAAAGAAC 334522
Query 76856 CCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACC 76915
|| || ||| || || | || |||||| | || | ||||| |||| | || ||
Sbjct 334523 CCTACCATGGGTAAACTGACATCGATGCATTTCTATGGATGGAAGAAGGGATTGAAGACT 334582
Query 76916 GGAATGTACTA 76926
|| ||||| ||
Sbjct 334583 GGTATGTATTA 334593
>seq1
Length=3254712
Score = 82.4 bits (90), Expect = 9e-11
Identities = 212/318 (67%), Gaps = 5/318 (2%)
Strand=Plus/Plus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|||||||| || || |||| ||| || | ||| |||||||| || || || |
Sbjct 1072277 GGTGCCAAAATTCCAAGAGGTGCCATTTTGAATGGTCCACCAGGTACTGGTAAAACATTA 1072336
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394
| ||| ||||| ||| |||||| | || ||||| | | ||| |||| | |
Sbjct 1072337 TTAGCCAAAGCCACCGCAGGTGAAGCTGGAGTTCCATTTTACTCTGTG-TCTGGTTCCGA 1072395
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
||||| || |||||||||||||||||||| ||| || || ||| | || ||| ||
Sbjct 1072396 ATTTGTCGAAATGTTTGTTGGTGTGGGTGCATCAAGAGTGCGTGATTTGTTCAAAACTGC 1072455
Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAG--CA- 175511
| | |||||| || | ||||| || ||||||| || ||||| | || ||| ||
Sbjct 1072456 CAGAGAAAATGCTCCTTCGATTGTTTTTGTTGATGAAATAGATGCAATCGGAAAGTCCAG 1072515
Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571
| | | | | || ||| || |||||||| |||||| | || | || ||| || |
Sbjct 1072516 AGGTAAAGGTAAGGGAATGGGAGGTAATGACGAAAGAGAAAACACCCTGAACCAATTATT 1072575
Query 175572 CACCGAGATGGATGGCTT 175589
|| |||||||| ||
Sbjct 1072576 AGTTGAAATGGATGGATT 1072593
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569324086560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |