Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq5 136 7e-27 seq2 131 3e-25 seq6 109 1e-18 >seq5 Length=831479 Score = 136 bits (150), Expect = 7e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| |||| | |||| || | || | || || || || |||||| Sbjct 265674 ATACCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCG 265615 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| |||||| || |||||||| || || || || || ||||| ||||| ||||| Sbjct 265614 GATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGT 265555 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| |||||||| || || || | || ||| ||||| ||||| ||| Sbjct 265554 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCA 265495 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||||| ||| || || ||||| |||| || || ||||| |||||||| || Sbjct 265494 ACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 265442 >seq2 Length=1335671 Score = 131 bits (144), Expect = 3e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| | || | || | || | || || || || ||||| || Sbjct 5066 ACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 5007 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 ||| |||||| || || ||||| || || ||||| |||||||| ||||| ||||| || Sbjct 5006 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4947 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || || || | ||| ||| || |||||||| || || Sbjct 4946 AATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGAC 4887 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 ||| || || || || ||||| || || ||||| || || |||||||||||| Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTTA 4835 >seq6 Length=817167 Score = 109 bits (120), Expect = 1e-18 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 193188 TCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCA 193247 || |||| |||||| || || || ||||| || ||||| || ||||||||||| ||| Sbjct 642546 TCTGATAGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCA 642487 Query 193248 GGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGAC 193307 || || || ||||| || || || || || ||| | ||| ||| || || || ||| Sbjct 642486 GGTGGAATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGAC 642427 Query 193308 TCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || ||||||||||| || || || || ||||| || ||||| Sbjct 642426 TCCACCTCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374 Score = 95.1 bits (104), Expect = 2e-14 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 ||||||||||||||| | |||| ||| | ||| | ||||| ||| || || || | Sbjct 643129 TACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYG 643070 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | | |||||| || |||||||| || || ||||| || ||||||||||| ||||| | Sbjct 643069 AKAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTG 643010 Query 193252 GTATTCCTTCTTTATCTTGTATTTT 193276 | || ||||| || || || || || Sbjct 643009 GAATACCTTCCTTGTCCTGAATCTT 642985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653983909840