Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq5 136 7e-27
seq2 131 3e-25
seq6 109 1e-18
>seq5
Length=831479
Score = 136 bits (150), Expect = 7e-27
Identities = 170/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| |||| | |||| || | || | || || || || ||||||
Sbjct 265674 ATACCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCG 265615
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| |||||| || |||||||| || || || || || ||||| ||||| |||||
Sbjct 265614 GATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGT 265555
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| |||||||| || || || | || ||| ||||| ||||| |||
Sbjct 265554 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCA 265495
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||||||| ||| || || ||||| |||| || || ||||| |||||||| ||
Sbjct 265494 ACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 265442
>seq2
Length=1335671
Score = 131 bits (144), Expect = 3e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| | || | || | || | || || || || ||||| ||
Sbjct 5066 ACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 5007
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| |||||| || || ||||| || || ||||| |||||||| ||||| ||||| ||
Sbjct 5006 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4947
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || || || | ||| ||| || |||||||| || ||
Sbjct 4946 AATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGAC 4887
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364
||| || || || || ||||| || || ||||| || || ||||||||||||
Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTTA 4835
>seq6
Length=817167
Score = 109 bits (120), Expect = 1e-18
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 193188 TCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCA 193247
|| |||| |||||| || || || ||||| || ||||| || ||||||||||| |||
Sbjct 642546 TCTGATAGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCA 642487
Query 193248 GGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGAC 193307
|| || || ||||| || || || || || ||| | ||| ||| || || || |||
Sbjct 642486 GGTGGAATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGAC 642427
Query 193308 TCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || ||||||||||| || || || || ||||| || |||||
Sbjct 642426 TCCACCTCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374
Score = 95.1 bits (104), Expect = 2e-14
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191
||||||||||||||| | |||| ||| | ||| | ||||| ||| || || || |
Sbjct 643129 TACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYG 643070
Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251
| | |||||| || |||||||| || || ||||| || ||||||||||| ||||| |
Sbjct 643069 AKAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTG 643010
Query 193252 GTATTCCTTCTTTATCTTGTATTTT 193276
| || ||||| || || || || ||
Sbjct 643009 GAATACCTTCCTTGTCCTGAATCTT 642985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899653983909840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |