Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 4e-31
seq2 149 1e-30
seq6 132 9e-26
>seq5
Length=831479
Score = 150 bits (166), Expect = 4e-31
Identities = 178/241 (74%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||||||||| | | || || || || | ||| | || || ||| |
Sbjct 265682 GTTCAATAATACCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGT 265623
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || || ||||| |||| | || || ||||| |||||||| ||||| ||||| ||||
Sbjct 265622 TGTAGTCGGATAAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTT 265563
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| |||||||| || || | || || || || | ||| |
Sbjct 265562 GGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAG 265503
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| ||||| ||||||| ||| ||||| ||||||||||| || || | ||| || ||||| |
Sbjct 265502 AAGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCT 265443
Query 192539 T 192539
|
Sbjct 265442 T 265442
>seq2
Length=1335671
Score = 149 bits (164), Expect = 1e-30
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || ||||| || | || | || || ||| || || |||||
Sbjct 5066 ACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGA 5007
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| | || |||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct 5006 TAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGG 4947
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || || | || ||||| || | || || ||||| ||
Sbjct 4946 AATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGAC 4887
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540
||| || |||||||| ||||| || | ||||||| || || |||||||||
Sbjct 4886 TTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTTA 4835
>seq6
Length=817167
Score = 132 bits (146), Expect = 9e-26
Identities = 133/173 (77%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
|| |||| |||| | | || ||||| ||||||||||||||||| ||||||||||| |||
Sbjct 642546 TCTGATAGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCA 642487
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
||||| || ||||| || || || || || | ||| ||||| || | ||||||||
Sbjct 642486 GGTGGAATACCTTCCTTGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGAC 642427
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| || || |||||||| || | ||| || | ||| ||||||||
Sbjct 642426 TCCACCTCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374
Score = 89.7 bits (98), Expect = 1e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAG 192367
|||||||||| | | || || ||||| | || | ||||| || || || || |
Sbjct 643129 TACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYG 643070
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
| | |||| | | || || ||||| ||||| |||||||| ||||||||||| |||||||
Sbjct 643069 AKAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTG 643010
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464
| || ||||| || || || || || | ||| || ||
Sbjct 643009 GAATACCTTCCTTGTCCTGAATCTTCTGTTTCACGTT 642973
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 192397 CCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTT 192456
|| |||||||| ||||||||||| |||||||| || ||||| || || || || || | |
Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724
Query 192457 TTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAAT 192516
|| || || || | || || ||||| || || || || ||||| || || || | |
Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664
Query 192517 GTTTTAATAAATATCTGCAT 192536
|| |||| || ||||||||
Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479533294950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |