Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 205 3e-47
>seq4
Length=942658
Score = 205 bits (226), Expect = 3e-47
Identities = 583/885 (66%), Gaps = 27/885 (3%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| ||||||||||| ||||| |||||| ||||| | || || |||| |||||
Sbjct 333676 GTATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGTT 333617
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
||||| ||||| || |||||||| || || ||| |||| || || || || |||||||
Sbjct 333616 GGATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGC 333557
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTA--TCTGCCTTCC 155807
|||| ||| ||| | | | || || || | | | | || ||| |||||
Sbjct 333556 TTCCAAAATAGAGTACCATAATTTTTGAGCCTTGAT--GGTGGATCTACCTCTACCTTCT 333499
Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
|||||||| | |||| | |||| | || ||||| ||| |||||||| || |
Sbjct 333498 TTTTCATATTTTTCGTATAATTC-TTCGA-ATTCATCACCATAAACATCACTCAAACCTG 333441
Query 155866 GG----CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACA---CGCTCC 155918
|| ||||| || |||| || | ||| || ||| | || || | || |
Sbjct 333440 GGGCTTCACTT----GGTGAAAAAAGAGTCCATTCTTGATT---GTTTTCAACTCTCTTC 333388
Query 155919 ATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATC 155977
|| |||| |||| ||| | ||| ||| | || ||||| | ||| | || | |
Sbjct 333387 ATGAATAAATCAGAAATCCATAATGCAGGGAACAAATCTCTTGC-TCTGATTTCTTCCTT 333329
Query 155978 GCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATA 156037
|| || || || | | || | || || |||||| | || |||||| |||||
Sbjct 333328 ACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATA 333269
Query 156038 CATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATT 156094
| |||||| |||| || ||| ||||| ||||| ||||| | ||| || || ||
Sbjct 333268 TAAAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTT 333209
Query 156095 GAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGA 156154
|| || | | ||| ||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct 333208 AAACACTCTAACCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGA 333149
Query 156155 ACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTG 156214
||| | || | || ||| ||||| |||| ||||||||||| | || ||||| |
Sbjct 333148 ACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAG 333089
Query 156215 AGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAG 156274
||| |||| |||| |||| |||||||||||||||||||||||| ||| | | ||
Sbjct 333088 AGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAA 333029
Query 156275 ATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATG 156334
| || ||| | |||| || ||| || ||||| || || | || || | |||||
Sbjct 333028 GAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATG 332969
Query 156335 AATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCC 156394
|||| || | |||||||| || || || || || | | | || | ||
Sbjct 332968 GGTAAAGTATCTTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACC 332909
Query 156395 GTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATC 156454
||||||| | || || ||||| || ||||||||| | ||| |||| ||||
Sbjct 332908 ATGAATACCAACAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATT 332849
Query 156455 AATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
| || || | || | | ||||| ||||| || || |||||
Sbjct 332848 CAATCTCAACAAATAAGATCTTTCCAACGTTTTGAAACCAAAATA 332804
Score = 86.0 bits (94), Expect = 2e-11
Identities = 193/284 (68%), Gaps = 12/284 (4%)
Strand=Plus/Plus
Query 289030 CCAACAGCATCAATTTCGTCAATGAA---AATCACACACGGAGAATTTTGTCTCGCAATT 289086
|||| ||||| | ||| ||||| || ||| || |||| ||| ||| || ||
Sbjct 745972 CCAATTGCATCCAATTCATCAATAAACACAATGGCA---GGAGCCTTTGCTCTGGCCTTT 746028
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
|||||||||||| || | || || | |||||| || | ||| ||||||| |||
Sbjct 746029 TGAAATAATTCTCTGACTCTTTTAGCACCCACACCAACGTATAGTTCATCAAATTCCGAA 746088
Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206
| || | || ||| | ||| ||||| |||||| ||| || |||| | ||
Sbjct 746089 CCAGACATAAAAAAGAAAGGAACACCAGCTTCACCTGCTGTTGCTCTAGCCAACAAAGTT 746148
Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC--AGCAG 289264
|||||||| ||||| ||||| ||| ||||| |||||||||| || || || || |
Sbjct 746149 TTACCTGTACCAGGAGGTCCTGTTAACAGAACACCCTTTGGTAATTCCGCACCTAAGGTG 746208
Query 289265 ACTTATATTTCTCAGGGCTCTTT-AAAAATTCTACAATTTCCTC 289307
|| | | || |||| ||||| ||||| ||||| | ||| ||
Sbjct 746209 AC--AAACTTGGAAGGG-TCTTTCAAAAAGTCTACCACTTCTTC 746249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816902266469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |