Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 205 3e-47 >seq4 Length=942658 Score = 205 bits (226), Expect = 3e-47 Identities = 583/885 (66%), Gaps = 27/885 (3%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||||||||| ||||| |||||| ||||| | || || |||| ||||| Sbjct 333676 GTATTCAACAATCTCACAACACAGATTAGAAGATTTGATCATACCCAAGTTCTGTTGGTT 333617 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 ||||| ||||| || |||||||| || || ||| |||| || || || || ||||||| Sbjct 333616 GGATTTCCTGTTGCATGCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGC 333557 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTA--TCTGCCTTCC 155807 |||| ||| ||| | | | || || || | | | | || ||| ||||| Sbjct 333556 TTCCAAAATAGAGTACCATAATTTTTGAGCCTTGAT--GGTGGATCTACCTCTACCTTCT 333499 Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 |||||||| | |||| | |||| | || ||||| ||| |||||||| || | Sbjct 333498 TTTTCATATTTTTCGTATAATTC-TTCGA-ATTCATCACCATAAACATCACTCAAACCTG 333441 Query 155866 GG----CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACA---CGCTCC 155918 || ||||| || |||| || | ||| || ||| | || || | || | Sbjct 333440 GGGCTTCACTT----GGTGAAAAAAGAGTCCATTCTTGATT---GTTTTCAACTCTCTTC 333388 Query 155919 ATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATC 155977 || |||| |||| ||| | ||| ||| | || ||||| | ||| | || | | Sbjct 333387 ATGAATAAATCAGAAATCCATAATGCAGGGAACAAATCTCTTGC-TCTGATTTCTTCCTT 333329 Query 155978 GCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATA 156037 || || || || | | || | || || |||||| | || |||||| ||||| Sbjct 333328 ACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATCTGCGTGCCATGGCTCGAGATA 333269 Query 156038 CATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATT 156094 | |||||| |||| || ||| ||||| ||||| ||||| | ||| || || || Sbjct 333268 TAAAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCGACATATCTAGCGGTATTGTT 333209 Query 156095 GAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGA 156154 || || | | ||| ||||| ||||| ||||| || || ||||| || ||||| || Sbjct 333208 AAACACTCTAACCATTGGAATGATACCGTTGGATGTACCGTTGGTACCTGCAATATAAGA 333149 Query 156155 ACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTG 156214 ||| | || | || ||| ||||| |||| ||||||||||| | || ||||| | Sbjct 333148 ACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACCACCAGCAGTCTTGGAAATCAG 333089 Query 156215 AGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAG 156274 ||| |||| |||| |||| |||||||||||||||||||||||| ||| | | || Sbjct 333088 AGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGAATCATCTTGCATAGCAACTAA 333029 Query 156275 ATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATG 156334 | || ||| | |||| || ||| || ||||| || || | || || | ||||| Sbjct 333028 GAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATTAAACAAAGTTGGAGAAGCATG 332969 Query 156335 AATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCC 156394 |||| || | |||||||| || || || || || | | | || | || Sbjct 332968 GGTAAAGTATCTTTTAGACATTAGATTATAGGTTTCAATAGCACTTTGTATATCATCACC 332909 Query 156395 GTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATC 156454 ||||||| | || || ||||| || ||||||||| | ||| |||| |||| Sbjct 332908 ATGAATACCAACAGCAACTCTCATAATCAAATGCTGAGGTCTTTCTGCAATTTGACCATT 332849 Query 156455 AATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 | || || | || | | ||||| ||||| || || ||||| Sbjct 332848 CAATCTCAACAAATAAGATCTTTCCAACGTTTTGAAACCAAAATA 332804 Score = 86.0 bits (94), Expect = 2e-11 Identities = 193/284 (68%), Gaps = 12/284 (4%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAA---AATCACACACGGAGAATTTTGTCTCGCAATT 289086 |||| ||||| | ||| ||||| || ||| || |||| ||| ||| || || Sbjct 745972 CCAATTGCATCCAATTCATCAATAAACACAATGGCA---GGAGCCTTTGCTCTGGCCTTT 746028 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||||||||| || | || || | |||||| || | ||| ||||||| ||| Sbjct 746029 TGAAATAATTCTCTGACTCTTTTAGCACCCACACCAACGTATAGTTCATCAAATTCCGAA 746088 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | || | || ||| | ||| ||||| |||||| ||| || |||| | || Sbjct 746089 CCAGACATAAAAAAGAAAGGAACACCAGCTTCACCTGCTGTTGCTCTAGCCAACAAAGTT 746148 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCC--AGCAG 289264 |||||||| ||||| ||||| ||| ||||| |||||||||| || || || || | Sbjct 746149 TTACCTGTACCAGGAGGTCCTGTTAACAGAACACCCTTTGGTAATTCCGCACCTAAGGTG 746208 Query 289265 ACTTATATTTCTCAGGGCTCTTT-AAAAATTCTACAATTTCCTC 289307 || | | || |||| ||||| ||||| ||||| | ||| || Sbjct 746209 AC--AAACTTGGAAGGG-TCTTTCAAAAAGTCTACCACTTCTTC 746249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816902266469