Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq9 138 1e-26
seq7 89.7 6e-12
>seq9
Length=343356
Score = 138 bits (152), Expect = 1e-26
Identities = 268/397 (68%), Gaps = 0/397 (0%)
Strand=Plus/Minus
Query 18086 GGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGC 18145
|||| ||||| | |||||||||||| | | || || || || | ||||| ||||
Sbjct 132914 GGGTGACCACGTACGGCGAGTCGCACTGTAAGTCTGTTGGATGTATTGTGGACGGGGTGC 132855
Query 18146 CGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGG 18205
|||| |||| | |||| ||||||||||||||| | ||| || || || || ||||
Sbjct 132854 CGCCAAACATGTCTCTGGTGGAGGCCGACATCCAGACACAGCTGACCCGTCGTCGTCCGG 132795
Query 18206 GCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCA 18265
| ||| | || |||| || || ||||| || | || |||||| || |
Sbjct 132794 GTCAGTCCAAGCTGACCACTCCTCGGAACGAAAAGGACCAGGTGGAAATCCAGAGCGGYA 132735
Query 18266 CGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGC 18325
||||| |||| || ||||| | || | | | | | ||| |||| ||||||
Sbjct 132734 CGGAGTTCGGCAAAACCCTCGGAACCCCTATTGCCATGGTGGTGAAGAACCAGGACCAGA 132675
Query 18326 GGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCT 18385
| ||| |||||| || || ||| |||| || | || || ||||||||||||||||
Sbjct 132674 GACCCCACGACTACTCTGAGATGGACAAGTATCCAAGACCTTCGCACGCCGACTACACCT 132615
Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445
|| | |||||||| |||||||||| || |||||| | ||||| || | || |
Sbjct 132614 ACCAGATGAAGTACGGAGTCAAGGCGTCCAGTGGAGGAGGCAGATCGTCAGCAAGAGAAA 132555
Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482
|| || || || || |||||||| | || |||||
Sbjct 132554 CCATCGGCCGTGTGGCGGCCGGCGCCATTGCYGAGAA 132518
>seq7
Length=830932
Score = 89.7 bits (98), Expect = 6e-12
Identities = 123/167 (74%), Gaps = 4/167 (2%)
Strand=Plus/Minus
Query 1592129 CCGTGGGACAAGGAGTTTTG-CGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187
|| ||||||||| ||||| | |||| || ||| | || | ||| | || || ||
Sbjct 521832 CCTTGGGACAAG-AGTTTCCTCAACGTTGACCAGGAAATGCTGTATGAAATCATTCTTGC 521774
Query 1592188 CGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG-TGCAAGTCTGTGGCCAACA 1592246
||||||||||||| | |||||||| || ||| | || ||| || ||| |||||| | |
Sbjct 521773 CGCCAACTACCTCAATATCAAGCCCCTCCTC-AACTCGGGCTGTAAGATTGTGGCAGAAA 521715
Query 1592247 TGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
|||||| |||||||| || || || ||| | || ||||| ||||||
Sbjct 521714 TGATCAGAGGCAAGTCTCCGGAAGAAATCAGAAAAACCTTCAACATC 521668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107136163606729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |