Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq9 138 1e-26 seq7 89.7 6e-12 >seq9 Length=343356 Score = 138 bits (152), Expect = 1e-26 Identities = 268/397 (68%), Gaps = 0/397 (0%) Strand=Plus/Minus Query 18086 GGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGC 18145 |||| ||||| | |||||||||||| | | || || || || | ||||| |||| Sbjct 132914 GGGTGACCACGTACGGCGAGTCGCACTGTAAGTCTGTTGGATGTATTGTGGACGGGGTGC 132855 Query 18146 CGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGG 18205 |||| |||| | |||| ||||||||||||||| | ||| || || || || |||| Sbjct 132854 CGCCAAACATGTCTCTGGTGGAGGCCGACATCCAGACACAGCTGACCCGTCGTCGTCCGG 132795 Query 18206 GCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCA 18265 | ||| | || |||| || || ||||| || | || |||||| || | Sbjct 132794 GTCAGTCCAAGCTGACCACTCCTCGGAACGAAAAGGACCAGGTGGAAATCCAGAGCGGYA 132735 Query 18266 CGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGC 18325 ||||| |||| || ||||| | || | | | | | ||| |||| |||||| Sbjct 132734 CGGAGTTCGGCAAAACCCTCGGAACCCCTATTGCCATGGTGGTGAAGAACCAGGACCAGA 132675 Query 18326 GGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCT 18385 | ||| |||||| || || ||| |||| || | || || |||||||||||||||| Sbjct 132674 GACCCCACGACTACTCTGAGATGGACAAGTATCCAAGACCTTCGCACGCCGACTACACCT 132615 Query 18386 ACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGA 18445 || | |||||||| |||||||||| || |||||| | ||||| || | || | Sbjct 132614 ACCAGATGAAGTACGGAGTCAAGGCGTCCAGTGGAGGAGGCAGATCGTCAGCAAGAGAAA 132555 Query 18446 CCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 || || || || || |||||||| | || ||||| Sbjct 132554 CCATCGGCCGTGTGGCGGCCGGCGCCATTGCYGAGAA 132518 >seq7 Length=830932 Score = 89.7 bits (98), Expect = 6e-12 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 1592129 CCGTGGGACAAGGAGTTTTG-CGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187 || ||||||||| ||||| | |||| || ||| | || | ||| | || || || Sbjct 521832 CCTTGGGACAAG-AGTTTCCTCAACGTTGACCAGGAAATGCTGTATGAAATCATTCTTGC 521774 Query 1592188 CGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG-TGCAAGTCTGTGGCCAACA 1592246 ||||||||||||| | |||||||| || ||| | || ||| || ||| |||||| | | Sbjct 521773 CGCCAACTACCTCAATATCAAGCCCCTCCTC-AACTCGGGCTGTAAGATTGTGGCAGAAA 521715 Query 1592247 TGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 |||||| |||||||| || || || ||| | || ||||| |||||| Sbjct 521714 TGATCAGAGGCAAGTCTCCGGAAGAAATCAGAAAAACCTTCAACATC 521668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136163606729