Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 154 1e-32
seq5 125 6e-24
seq6 107 2e-18
>seq2
Length=1335671
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| || |||||||| || ||||| || ||||| ||| | ||
Sbjct 4839 ATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCTTCC 4898
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| ||||| || || || || |||
Sbjct 4899 GACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 4958
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || |||||||| || || || |||| || |||| | | || || || |||
Sbjct 4959 CAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTACAAC 5018
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|| ||||||||||| || || ||||| || ||| ||||| | || || ||
Sbjct 5019 ATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGGTGG 5068
>seq5
Length=831479
Score = 125 bits (138), Expect = 6e-24
Identities = 159/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| | || || |||| ||||| || || || | ||||| ||| | |
Sbjct 265444 GATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTC 265503
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || | || || |||||||||||||| || ||||| || || || || ||
Sbjct 265504 TGATACCATTGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCA 265563
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | |||||||| || || || || | || || |||| | | || || || ||
Sbjct 265564 ACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTACAA 265623
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||| ||||||||||| || || |||||||||||| ||||
Sbjct 265624 CATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATT 265662
>seq6
Length=817167
Score = 107 bits (118), Expect = 2e-18
Identities = 114/152 (75%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| ||||| ||||| || ||||| ||||| || || || || ||||| | |||||||||
Sbjct 642976 GTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTT 643035
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || || | ||||| |||| | || || || ||||||||||| |||||
Sbjct 643036 GCGGGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCC 643095
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || ||||||||| ||||| | || ||
Sbjct 643096 ACACTCCATTTGGTGTTGAGATTGAGAGGTGG 643127
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || ||||||||||| || || || || || | |
Sbjct 642374 ATGCAGATCTTTGTCAAGACACTTACGGGTAAAACTATCACCCTAGAGGTGGAGTCGTCA 642433
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||||| ||||| || ||||| ||||| || || || || |||
Sbjct 642434 GACACCATTGACAATGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAA 642493
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| | ||||||||||| || |||||| |||| ||
Sbjct 642494 CAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGA 642528
Score = 84.2 bits (92), Expect = 2e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || |||| || || || || || || || || || || || ||| | |
Sbjct 641643 GATGCAGATTTTCGTTAAGACACTTACAGGCAAGACCATCACCCTTGAGGTGGAATCTTC 641702
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || ||||| |||||||| ||||| ||||| || || || || ||
Sbjct 641703 GGACACCATTGACAACGTGAAACAGAAGATCCAGGACAAGGAAGGTATTCCACCTGACCA 641762
Query 24823 ACAACGTTTGATCTTTGCCGG 24843
||| | ||||||||||| ||
Sbjct 641763 ACAGAGATTGATCTTTGCGGG 641783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897391922360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |