Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
seq6 95.1 1e-14
>seq2
Length=1335671
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 110269 TAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCC 110328
|||||||||||| || || ||||| | ||||| || ||||||||| | ||| || |
Sbjct 4835 TAAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATC 4894
Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388
| ||| || | | | | || || || ||||| ||||| ||||| | || ||
Sbjct 4895 TTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4954
Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448
||||||||| | || | ||| ||||| || |||| || | ||||| | | || ||
Sbjct 4955 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTA 5014
Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||||| ||||| ||||| || | ||| | || || ||| || |||| ||
Sbjct 5015 CAACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065
>seq6
Length=817167
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 110348 GTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTAT 110407
|| |||||||||||| ||||| ||||| | || || ||||| ||| | || | |
Sbjct 642976 GTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTT 643035
Query 110408 GCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCT 110467
|||||||| || | ||||| | ||||| | | || ||||||||||||||||||||
Sbjct 643036 GCGGGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCC 643095
Query 110468 ACGTTGCACATGGTGTTAAGACTGCGAGGGGGaaaaaa 110505
|| | || ||||||| ||| || |||| || | |||
Sbjct 643096 ACACTCCATTTGGTGTTGAGATTGAGAGGTGGTACAAA 643133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841413834241
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |