Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 seq6 95.1 1e-14 >seq2 Length=1335671 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 110269 TAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCC 110328 |||||||||||| || || ||||| | ||||| || ||||||||| | ||| || | Sbjct 4835 TAAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATC 4894 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | ||| || | | | | || || || ||||| ||||| ||||| | || || Sbjct 4895 TTCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4954 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 ||||||||| | || | ||| ||||| || |||| || | ||||| | | || || Sbjct 4955 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTA 5014 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| ||||| ||||| || | ||| | || || ||| || |||| || Sbjct 5015 CAACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065 >seq6 Length=817167 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 110348 GTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTAT 110407 || |||||||||||| ||||| ||||| | || || ||||| ||| | || | | Sbjct 642976 GTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGATTGATCTTT 643035 Query 110408 GCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCT 110467 |||||||| || | ||||| | ||||| | | || |||||||||||||||||||| Sbjct 643036 GCGGGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAAAAGAATCC 643095 Query 110468 ACGTTGCACATGGTGTTAAGACTGCGAGGGGGaaaaaa 110505 || | || ||||||| ||| || |||| || | ||| Sbjct 643096 ACACTCCATTTGGTGTTGAGATTGAGAGGTGGTACAAA 643133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841413834241