Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=3254712
Score = 107 bits (118), Expect = 2e-18
Identities = 149/203 (73%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219
||||| || |||||||| || ||| || | ||||| |||| |||| | ||||||||
Sbjct 677204 ATTAAGGTGTCTCAATTAGAAGGTTATATTTCRGAACATACAGGTTATCAYCATGGTGAC 677263
Query 165220 -CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT 165278
| ||| ||| || | || ||| || || ||||||| ||||||| | |||||| |
Sbjct 677264 GCGTCATTGATGC-AATCAATTATTGGTTTGGCTCAAGATTATGTTGGTTCTAATAATTT 677322
Query 165279 AG-CATTACTTGA-ACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCT 165336
| |||| |||| ||| ||||| ||||||| | ||| |||| ||||||||| ||
Sbjct 677323 AAACATT--TTGATACCACATGGTGGATTTGGTTCTAGAGCTCAAGGTGGTAAAGATGCT 677380
Query 165337 GCGGCATCAAGATATATTTATAC 165359
||||| |||||||||||| |||
Sbjct 677381 GCGGCTGCAAGATATATTTTTAC 677403
Score = 104 bits (114), Expect = 3e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361
||| || | || || || |||| |||| ||| ||||| ||| | ||||| | | |||
Sbjct 1710271 GTTGAACGTCATTTAATGGATGATGATCCTGTTCTATTCAATCGTCAACCTTCGTTGCAT 1710212
Query 50362 AAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAATGAAT 50421
||| || ||| || | ||||||| || ||| || |||| |||||||
Sbjct 1710211 AAAATGTCCATGATGTGTCACAGAGTTAAAGTTATGCCATACTCTACCTTTAGAATGAAT 1710152
Query 50422 TTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTT 50481
|| || | ||| | |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct 1710151 CTATCTGTCACTTCTCCGTATAATGCTGATTTCGATGGTGATGAAATGAATTTGCATGTT 1710092
Query 50482 CCTCAATCATATGGAGCTACTGCTGAA 50508
|| |||||||||| | | | ||||||
Sbjct 1710091 CCACAATCATATGAAACAAGAGCTGAA 1710065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628530909304320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |