Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=3254712 Score = 107 bits (118), Expect = 2e-18 Identities = 149/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 ||||| || |||||||| || ||| || | ||||| |||| |||| | |||||||| Sbjct 677204 ATTAAGGTGTCTCAATTAGAAGGTTATATTTCRGAACATACAGGTTATCAYCATGGTGAC 677263 Query 165220 -CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT 165278 | ||| ||| || | || ||| || || ||||||| ||||||| | |||||| | Sbjct 677264 GCGTCATTGATGC-AATCAATTATTGGTTTGGCTCAAGATTATGTTGGTTCTAATAATTT 677322 Query 165279 AG-CATTACTTGA-ACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCT 165336 | |||| |||| ||| ||||| ||||||| | ||| |||| ||||||||| || Sbjct 677323 AAACATT--TTGATACCACATGGTGGATTTGGTTCTAGAGCTCAAGGTGGTAAAGATGCT 677380 Query 165337 GCGGCATCAAGATATATTTATAC 165359 ||||| |||||||||||| ||| Sbjct 677381 GCGGCTGCAAGATATATTTTTAC 677403 Score = 104 bits (114), Expect = 3e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 50302 GTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAATAGGCAACCAACACTTCAT 50361 ||| || | || || || |||| |||| ||| ||||| ||| | ||||| | | ||| Sbjct 1710271 GTTGAACGTCATTTAATGGATGATGATCCTGTTCTATTCAATCGTCAACCTTCGTTGCAT 1710212 Query 50362 AAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAACCAGTAAAAACATTTAAAATGAAT 50421 ||| || ||| || | ||||||| || ||| || |||| ||||||| Sbjct 1710211 AAAATGTCCATGATGTGTCACAGAGTTAAAGTTATGCCATACTCTACCTTTAGAATGAAT 1710152 Query 50422 TTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTT 50481 || || | ||| | |||||||||||||| ||||| |||||||||||||| |||||| Sbjct 1710151 CTATCTGTCACTTCTCCGTATAATGCTGATTTCGATGGTGATGAAATGAATTTGCATGTT 1710092 Query 50482 CCTCAATCATATGGAGCTACTGCTGAA 50508 || |||||||||| | | | |||||| Sbjct 1710091 CCACAATCATATGAAACAAGAGCTGAA 1710065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530909304320