Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq6 116 2e-21
seq2 96.9 2e-15
>seq6
Length=817167
Score = 116 bits (128), Expect = 2e-21
Identities = 116/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | ||||||||||| || ||| |||||||| |||||||| || ||
Sbjct 643128 ACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGA 643069
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || | | |||| || ||||| || || ||||| ||||| | ||| || || | ||
Sbjct 643068 KAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGG 643009
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA 33673
| |||||| ||||| ||| ||||||||||
Sbjct 643008 AATACCTTCCTTGTCCTGAATCTTCTGTTTCA 642977
Score = 105 bits (116), Expect = 4e-18
Identities = 130/175 (74%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 33577 TCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCT 33636
|| || || || | | |||| ||||| ||||| || ||||| ||||| | ||| || ||
Sbjct 642546 TCTGATAGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCA 642487
Query 33637 TGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGA 33695
| || | |||||| ||||| ||| |||||||||| ||| |||| |||||| ||
Sbjct 642486 GGTGGAATACCTTCCTTGTCCTGAATCTTCTGTTTCA-CATTGTCAATGGTGTCTGACGA 642428
Query 33696 TTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
||||| || | ||||| |||||||| || | || || |||||||||||||||
Sbjct 642427 CTCCACCTCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCATA 642373
>seq2
Length=1335671
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || || || || || ||| || ||||| |||||||| || |
Sbjct 5067 CACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAG 5008
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | |||| |||||||| || || ||||| || || | || || || | |
Sbjct 5007 ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTG 4948
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || || || |||| ||| | ||||||| |||||
Sbjct 4947 GAATACCTTCCTTGTCTTGGATCTTTTGCTT-GACATTGTCAATGGTGTCGGAAGATTCG 4889
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| || || || ||||| || | ||||| || || || |||||
Sbjct 4888 ACTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCAT 4839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703851775040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |