Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6 116 2e-21 seq2 96.9 2e-15 >seq6 Length=817167 Score = 116 bits (128), Expect = 2e-21 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | ||||||||||| || ||| |||||||| |||||||| || || Sbjct 643128 ACCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGA 643069 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | | |||| || ||||| || || ||||| ||||| | ||| || || | || Sbjct 643068 KAGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGG 643009 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCA 33673 | |||||| ||||| ||| |||||||||| Sbjct 643008 AATACCTTCCTTGTCCTGAATCTTCTGTTTCA 642977 Score = 105 bits (116), Expect = 4e-18 Identities = 130/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 33577 TCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCT 33636 || || || || | | |||| ||||| ||||| || ||||| ||||| | ||| || || Sbjct 642546 TCTGATAGCGTTCTTCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCA 642487 Query 33637 TGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGA 33695 | || | |||||| ||||| ||| |||||||||| ||| |||| |||||| || Sbjct 642486 GGTGGAATACCTTCCTTGTCCTGAATCTTCTGTTTCA-CATTGTCAATGGTGTCTGACGA 642428 Query 33696 TTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 ||||| || | ||||| |||||||| || | || || ||||||||||||||| Sbjct 642427 CTCCACCTCTAGGGTGATAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCATA 642373 >seq2 Length=1335671 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || || || || || ||| || ||||| |||||||| || | Sbjct 5067 CACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAG 5008 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | |||| |||||||| || || ||||| || || | || || || | | Sbjct 5007 ATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTG 4948 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || || || |||| ||| | ||||||| ||||| Sbjct 4947 GAATACCTTCCTTGTCTTGGATCTTTTGCTT-GACATTGTCAATGGTGTCGGAAGATTCG 4889 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| || || || ||||| || | ||||| || || || ||||| Sbjct 4888 ACTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCAT 4839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703851775040