Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 6e-23
seq2 111 4e-19
seq4 84.2 5e-11
>seq5
Length=831479
Score = 123 bits (136), Expect = 6e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||| ||||| ||| |||||| || |
Sbjct 265453 TTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGATACCAT 265512
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||||||||||| ||||| || ||||| || || ||| |||||| |
Sbjct 265513 TGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAACAAAGATT 265572
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
|||||||| || ||||| || ||||| || || || || |||| |||||| |||| ||
Sbjct 265573 GATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTACAACATCCAAAA 265632
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || ||||||||| | || ||||||
Sbjct 265633 GGAATCCACTCTTCACTTGGTGTTGAGA 265660
>seq2
Length=1335671
Score = 111 bits (122), Expect = 4e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || || || | ||||| ||| ||| ||||| | ||
Sbjct 4854 AAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCTTCCGACACCATTGACAAT 4913
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||||||||| ||||| || ||||| ||| || ||| |||||| | |||||
Sbjct 4914 GTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTAATCTTT 4973
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| |||||||| || || || || | || |||||| |||| || || ||
Sbjct 4974 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTACAACATCCAAAAGGAATCC 5033
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| |||||| | || ||||||
Sbjct 5034 ACCCTTCACTTAGTCTTGAGA 5054
>seq4
Length=942658
Score = 84.2 bits (92), Expect = 5e-11
Identities = 175/258 (68%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| ||||| || | ||||| || |||| || | || || ||||||| || |
Sbjct 333600 GCATCCTTATAAAGCATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTAC 333541
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
|| | || ||| || || | ||| | ||| |||| ||||||||||| ||| | || ||
Sbjct 333540 CATAATTTTTGAGCCTTGATGGTGGATCTACCTCTACCTTCTTTTTCATATTTTTCGTAT 333481
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAA 173285
| |||||||| || | || |||| || |||| ||| || ||||| | || ||||
Sbjct 333480 AATTCTTCGAATTCATCACCATAAACATCACTCAA-ACCTGGGGCTTCACTTGGTGAAAA 333422
Query 173286 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 173345
||| |||| | | || | | || || ||||||||||| | || ||| |||| | ||
Sbjct 333421 AAGAGTCCATTCTTGATTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGC 333362
Query 173346 GTAGAACAATTGCCTTGC 173363
|||||| | |||||
Sbjct 333361 AGGGAACAAATCTCTTGC 333344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820239743077
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |