Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 3e-16
seq4 84.2 2e-11
>seq2
Length=1335671
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231
|| |||||| | || || ||||| | ||||| || | || || | ||||||||| |
Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895
Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291
||| || || || | || || ||||| || || || || ||||| || || ||
Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955
Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351
|| |||||| | || | | || || ||| | ||||| | ||||| | || |||
Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015
Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
|| || ||||| ||||||||| |||| ||||| || ||||||||||| ||
Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065
>seq4
Length=942658
Score = 84.2 bits (92), Expect = 2e-11
Identities = 206/308 (67%), Gaps = 6/308 (2%)
Strand=Plus/Minus
Query 137184 CCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCATAAGAATCATATGT 137243
|||||||||||| || || | || ||||||| ||| || | || | |||||||
Sbjct 334093 CCACAAATCAAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGG 334034
Query 137244 TCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGTAAATAGTTTCGGA 137303
|||| | ||| ||||| |||||||| | | || | | ||| |||||||| |
Sbjct 334033 ACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAA 333974
Query 137304 GATTTTTCTATTCAATTCTCTAGCTTCTTGGCTG--TCGTAGGGCATATC-CAATATAGC 137360
|||| | | || | ||||||||| || ||| | || | |||| ||| || ||
Sbjct 333973 AATTTGTATGTTTAGTTCTCTAGC--CTGGGCAGAATCAAATGGCA-ATCTTAACATCAT 333917
Query 137361 GAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGTTTAAAATTTGATAT 137420
||| ||||| || | ||||||| || | | | || ||||||| | | | || ||| |
Sbjct 333916 GAAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATCT 333857
Query 137421 TTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTATTGAGATTGTTAGTAAC 137480
| ||| ||| ||||||| ||||| ||| || || |||| | ||| || | |||
Sbjct 333856 TCTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAAC 333797
Query 137481 GACTCTGG 137488
||| |||
Sbjct 333796 AACTTTGG 333789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094194143840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |