Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2 100 3e-16 seq4 84.2 2e-11 >seq2 Length=1335671 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | || || ||||| | ||||| || | || || | ||||||||| | Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 ||| || || || | || || ||||| || || || || ||||| || || || Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 || |||||| | || | | || || ||| | ||||| | ||||| | || ||| Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || ||||| ||||||||| |||| ||||| || ||||||||||| || Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065 >seq4 Length=942658 Score = 84.2 bits (92), Expect = 2e-11 Identities = 206/308 (67%), Gaps = 6/308 (2%) Strand=Plus/Minus Query 137184 CCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCATAAGAATCATATGT 137243 |||||||||||| || || | || ||||||| ||| || | || | ||||||| Sbjct 334093 CCACAAATCAAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGG 334034 Query 137244 TCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATAGTAAATAGTTTCGGA 137303 |||| | ||| ||||| |||||||| | | || | | ||| |||||||| | Sbjct 334033 ACCGTCAACTTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAA 333974 Query 137304 GATTTTTCTATTCAATTCTCTAGCTTCTTGGCTG--TCGTAGGGCATATC-CAATATAGC 137360 |||| | | || | ||||||||| || ||| | || | |||| ||| || || Sbjct 333973 AATTTGTATGTTTAGTTCTCTAGC--CTGGGCAGAATCAAATGGCA-ATCTTAACATCAT 333917 Query 137361 GAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTGTTTAAAATTTGATAT 137420 ||| ||||| || | ||||||| || | | | || ||||||| | | | || ||| | Sbjct 333916 GAAGGCATCAGCTAAACCTTGAACCCCAACAGCAATTGGTCTGTTTCTCATGTTGGATCT 333857 Query 137421 TTGAGCGCTAACAAGCGGATAAAAGTTTGCGTCTATAATTCTATTGAGATTGTTAGTAAC 137480 | ||| ||| ||||||| ||||| ||| || || |||| | ||| || | ||| Sbjct 333856 TCTAGCTTCTTCAACCGGATAATAGTTTCTGTCGATGATCTTATTCAAATTCTTGGCAAC 333797 Query 137481 GACTCTGG 137488 ||| ||| Sbjct 333796 AACTTTGG 333789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094194143840