Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 seq5 100 2e-16 seq6 84.2 2e-11 >seq2 Length=1335671 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||||||||| |||||||| | || || |||||||||||| | ||| ||| | Sbjct 4836 AAAATGCAAATTTTCGTTAAAACCCTTACCGGTAAGACCATTACCCTTGAAGTCGAATCT 4895 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| | ||| | | || || ||||| || ||||| ||||| | || ||| Sbjct 4896 TCCGACACCATTGACAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 4955 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | ||| || || ||||| ||||| || ||| | || ||| Sbjct 4956 CAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTATCTGACTAC 5015 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||||| || || || ||||| ||||| || |||| || Sbjct 5016 AACATCCAAAAGGAATCCACCCTTCACTTAGTCTTGAGATTGAGAGGTGG 5065 >seq5 Length=831479 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || |||||||||||||| || || || ||||| |||||||| || | ||| ||| | Sbjct 265442 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 265501 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| | ||| | | || || ||||| || || || ||||| | || ||| Sbjct 265502 TCTGATACCATTGACAACGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGAC 265561 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | || || || ||||||||||| || ||| | ||| ||| Sbjct 265562 CAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGACGGTAGAACCTTATCCGACTAC 265621 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||||| || || || || || ||||| ||| |||| || Sbjct 265622 AACATCCAAAAGGAATCCACTCTTCACTTGGTGTTGAGATTAAGAGGTGG 265671 >seq6 Length=817167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 106327 TTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGC 106386 ||| | | |||||||| || ||| ||||| ||||| | || ||| ||||| || Sbjct 642968 TTGACAACGTGAAACAGAAGATTCAGGACAAGGAAGGTATTCCACCTGACCAACAGAGAT 643027 Query 106387 TTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAA 106446 | || | |||||| || |||||||| || | ||| | || |||||||| |||| Sbjct 643028 TGATCTTTGCGGGTAAGCAATTAGAGGACGGAAGAACGCTMTCRGAYTACAACATTCAAA 643087 Query 106447 AAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||||| ||||| ||||| || ||||| || |||| || Sbjct 643088 AAGAATCCACACTCCATTTGGTGTTGAGATTGAGAGGTGG 643127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329418574496