Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq5 102 7e-17 seq2 102 7e-17 seq6 98.7 9e-16 >seq5 Length=831479 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | ||| ||||||||||| || | || |||||||| |||||||| |||| Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 265612 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||||| |||| || | |||||||| || || ||||| | || ||||| | || Sbjct 265611 AAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGG 265552 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||| || |||||||||||| | |||| | | || || ||||| || Sbjct 265551 ATACCTTCCTTATCTTGGATCTTTTGCTTGA-CGTTGTCAATGGTATCAGAAGATTCAAC 265493 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| || || || || ||||| || ||||| Sbjct 265492 TTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 265445 >seq2 Length=1335671 Score = 102 bits (112), Expect = 7e-17 Identities = 169/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 35499 TCTCTTTATTTCCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAA 35555 |||||| || ||||||| | || ||||| || || || | || |||||||| | Sbjct 5078 TCTCTTC-TTACCACCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGA 5020 Query 35556 TGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCT 35615 ||||||| || | ||||||| |||| |||| |||||||| ||||| || || | | Sbjct 5019 TGTTGTAGTCAGATAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTT 4960 Query 35616 GCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGT 35675 | ||||| | |||| | |||||||| |||||||||||| | | | | | |||| Sbjct 4959 GTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGT 4900 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || ||||| || || | || || || ||||| || | ||||| || || || |||| Sbjct 4899 CGGAAGATTCGACTTCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCA 4840 Query 35736 TT 35737 || Sbjct 4839 TT 4838 >seq6 Length=817167 Score = 98.7 bits (108), Expect = 9e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 35580 CGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCT 35639 |||| |||| ||| ||||| ||||| ||||| | ||| ||||| | |||| | |||| Sbjct 642530 CGTCTTCCAACTGTTTACCAGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCT 642471 Query 35640 TGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGA 35699 ||||| ||||| || |||| | | | | ||||| ||| |||||||| | |||| Sbjct 642470 TGTCCTGAATCTTCTGTTTCACATTGTCAATGGTGTCTGACGACTCCACCTCTAGGGTGA 642411 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||||||||| | || || ||||| |||||||| Sbjct 642410 TAGTTTTACCCGTAAGTGTCTTGACAAAGATCTGCAT 642374 Score = 89.7 bits (98), Expect = 5e-13 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || |||||||||||||| | || || |||||||||||||| || | Sbjct 643127 CCACCTCTCAATCTCAACACCAAATGGAGTGTGGATTCTTTTTGAATGTTGTARTCYGAK 643068 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | |||| |||| || | |||||||||||||| ||||| | ||| ||||| | ||| Sbjct 643067 AGCGTTCTTCCGTCCTCTAATTGCTTACCCGCAAAGATCAATCTCTGTTGGTCAGGTGGA 643008 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCA 35660 | | ||||||||| ||||| || |||| Sbjct 643007 ATACCTTCCTTGTCCTGAATCTTCTGTTTCA 642977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793391507960