Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 154 1e-32 seq5 138 1e-27 seq6 86.0 6e-12 >seq2 Length=1335671 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || ||| || | ||| || |||||||||||||| ||||||||||| Sbjct 5065 CCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 5006 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | || || || ||||| || || | || || || || || Sbjct 5005 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGA 4946 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || ||||| ||||| ||| | |||||||| ||||| || Sbjct 4945 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACT 4886 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || |||||||| |||||||| | ||||||||||||||||||||||| Sbjct 4885 TCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTT 4836 >seq5 Length=831479 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| | || |||||| | ||| || |||||||||||||| |||||||||||| Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 265612 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| || | || || || || || ||||| | || || || || || Sbjct 265611 AAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGG 265552 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || ||||| || ||||| ||||| ||| | || || || ||||| || Sbjct 265551 ATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACT 265492 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || | ||| ||||| ||||| ||||| || || || ||||||||||| ||| Sbjct 265491 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTG 265441 >seq6 Length=817167 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||||| ||||| | ||| || || || || || ||||| || || || || || ||| Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || ||| | ||||| || |||||||| || || || ||||| || || || | Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || ||||||||||| ||||| Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398166253240