Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq2 154 1e-32
seq5 138 1e-27
seq6 86.0 6e-12
>seq2
Length=1335671
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || ||| || | ||| || |||||||||||||| |||||||||||
Sbjct 5065 CCACCTCTCAATCTCAAGACTAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGAT 5006
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || | || || || ||||| || || | || || || || ||
Sbjct 5005 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGA 4946
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || ||||| ||||| ||| | |||||||| ||||| ||
Sbjct 4945 ATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCGGAAGATTCGACT 4886
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || |||||||| |||||||| | |||||||||||||||||||||||
Sbjct 4885 TCAAGGGTAATGGTCTTACCGGTAAGGGTTTTAACGAAAATTTGCATTTT 4836
>seq5
Length=831479
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || |||||| | ||| || |||||||||||||| ||||||||||||
Sbjct 265671 CCACCTCTTAATCTCAACACCAAGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 265612
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || | || || || || || ||||| | || || || || ||
Sbjct 265611 AAGGTTCTACCGTCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGGTCAGGTGGG 265552
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || ||||| ||||| ||| | || || || ||||| ||
Sbjct 265551 ATACCTTCCTTATCTTGGATCTTTTGCTTGACGTTGTCAATGGTATCAGAAGATTCAACT 265492
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | ||| ||||| ||||| ||||| || || || ||||||||||| |||
Sbjct 265491 TCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTG 265441
>seq6
Length=817167
Score = 86.0 bits (94), Expect = 6e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633
|| ||||| ||||| | ||| || || || || || ||||| || || || || || |||
Sbjct 641783 CCCGCAAAGATCAATCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCCTGGATCTTCTGT 641724
Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693
|| || ||| | ||||| || |||||||| || || || ||||| || || || |
Sbjct 641723 TTCACGTTGTCAATGGTGTCCGAAGATTCCACCTCAAGGGTGATGGTCTTGCCTGTAAGT 641664
Query 134694 GTTTTAACGAAAATTTGCAT 134713
|| ||||||||||| |||||
Sbjct 641663 GTCTTAACGAAAATCTGCAT 641644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398166253240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |