Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq5 241 1e-58
>seq5
Length=831479
Score = 241 bits (266), Expect = 1e-58
Identities = 419/601 (70%), Gaps = 14/601 (2%)
Strand=Plus/Plus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| | || ||||| |||| ||||| || ||||||||||||||||| || |
Sbjct 304403 AGATTTGTGCTCTTCCCAATCAAATACCATGAAATCTGGCAAATGTACAAAAAGGCCGAA 304462
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815
||||| || ||||| || |||||| |||| ||| |||| |||||| ||| | |||| |
Sbjct 304463 GCGTCTTTCTGGACCGCCGAAGAAATTGACTTGTCTAAGGACTTA-CACGACTGGAA--C 304519
Query 43816 ATTA----AAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCG 43870
| | ||| | || |||| | ||| || | || ||||| |||||||||||
Sbjct 304520 AACAGACTAAATGATAACGAAAGATTTTTCATTACCAGAGTGTTGGCCTTTTTTGCTGCT 304579
Query 43871 AGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCA 43930
|| || || ||||| |||||||||||| || || || || ||| | ||
Sbjct 304580 TCAGATGGTATTGTCAACGAAAATTTGGTTGAAAACTTCTCGGCTGAGGTGCAAATCCCT 304639
Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990
||||| ||||| ||||| || ||||| || ||||| || |||||||||| |||
Sbjct 304640 GAAGCCAAGTGTTTCTATGGTTTCCAAATCATGATGGAAAACATCCATTCGGAAACATAC 304699
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCG 44050
| |||| || || || |||| ||| | || | | || || |||||
Sbjct 304700 TCCTTATTGATTGACACCTATGTCAAGGATCCAAAGGAATCGGAATTCTTATTCAATGCC 304759
Query 44051 ATAGAAA-CAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---A 44106
|| |||| || | | || |||||| | || || ||||||||| | | |||||| |
Sbjct 304760 ATTGAAAACATTCCATGT-ATTAAAGAAAAGGCCGACTGGGCCATGAGATGGATGTGCGA 304818
Query 44107 TTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166
| ||||| | || || ||| || | || || ||||| | ||| ||||| || || ||
Sbjct 304819 TGAAAATGCATTATTCGGTGAAAGATTAGTTGCCTTTGCCGCTGTTGAAGGTATCTTTTT 304878
Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226
|| ||||||||||| |||| || ||||| || ||| ||||||||||||| || |||||
Sbjct 304879 CTCCGGATCGTTTGCTTCCATTTTCTGGTTGAAAAAAAGAGGTTTGATGCCAGGTTTGAC 304938
Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
||||| || || ||||| | | |||||||| ||||| |||||||||||| || ||
Sbjct 304939 ATTTTCCAACGAATTAATTTGCAGAGATGAAGGTTTACACACCGATTTTGCTTGTTTATT 304998
Query 44287 A 44287
|
Sbjct 304999 A 304999
Score = 172 bits (190), Expect = 4e-38
Identities = 454/683 (66%), Gaps = 24/683 (4%)
Strand=Plus/Minus
Query 19243 ATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTT 19302
||||| || || || ||||| ||| || ||| | |||||||||| || | |
Sbjct 673767 ATTGGTGGGCTGGATACCGAGTTCACTGCCATTTTTAGAAGAGCATTTGCCTCTAGAATC 673708
Query 19303 TTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTTA 19361
||| || ||| || ||| || || |||| ||| | ||||| || | || |||||
Sbjct 673707 TTTCCTCCAGGGGTAATTGAAAAAATGGGTATG-ACCCATGTCAAGGGTATGTTACTTTA 673649
Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---C 19418
||| || |||||| || || || |||||||| || || || |||| | | | |
Sbjct 673648 TGGTCCCCCGGGTACAGGTAAGACCTTAATTGCAAGGCAAATTGGTAAGATGTTGAATGC 673589
Query 19419 AAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478
||| | ||| |||||||| ||||| |||||||| || ||||| || ||| ||
Sbjct 673588 AAAGGAGCCT---AAAATTGTCAATGGGCCTGAAATTTTGTCCAAATACGTTGGTTCGTC 673532
Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAA-ACGTTTAGGGC 19537
||||| ||| | || ||| || || || ||||| ||| | || | | | ||
Sbjct 673531 AGAAGAGAATATTCGTAATTTATTCAAGGATGCAGAAGACGAATACAAGAAGA--AAGGT 673474
Query 19538 GCAAAAGT--TCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAG 19595
| | || || ||||| || || || | |||||||| || | | | ||| |||||
Sbjct 673473 G-ATGCGTCGTCATTGCATATCATTATTTTCGATGAATTAGATTCTGTTTTTAAACAAAG 673415
Query 19596 AGGTTCT------GGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAA 19649
||||||| | || || || || ||| | ||| || |||||| | || | ||
Sbjct 673414 AGGTTCTAGAGGCGATGGAACAGGTGTGGCTGATAATGTGGTGAATCAATTGCTAGCCAA 673355
Query 19650 ATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGA 19709
| | || ||||| ||||| |||| ||||| || || ||||| ||||| || |||| ||
Sbjct 673354 AATGGATGGTGTCGACCAATTGAACAATATCTTGGTCATTGGAATGACCAACAGACGTGA 673295
Query 19710 ATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTT 19769
||||| || || |||||| || |||| ||| | || ||| | || |||||||| | ||
Sbjct 673294 TTTAATTGATAGTGCCTTACTAAGACCGGGTAGATTTGAAGTTCAGGTCGAAATTCATTT 673235
Query 19770 ACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT--ACATACATCAACCATGCGACAA 19827
||| |||||| || | || ||||||| || || | | | | ||| ||| || ||
Sbjct 673234 ACCAGATGAAGAGGGCAGATTGCAAATTTTGAAAATTAAGACAAAGCAA--ATGAGAGAA 673177
Query 19828 AATAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTAT 19887
|| || | || ||| | || || ||||||| | |||||| ||||| ||||
Sbjct 673176 AACAATGTCTTGAATAAGGACGTTGATCTAGCCAAGCTTGCAGAATTGACCAAGAACTTC 673117
Query 19888 AGCGGCGCAGAACTTGAGGGATT 19910
|| || ||| ||||||| ||
Sbjct 673116 TCTGGTGCCGAAATTGAGGGTTT 673094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455820772185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |