Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 7e-17
>seq4
Length=942658
Score = 102 bits (112), Expect = 7e-17
Identities = 359/559 (64%), Gaps = 9/559 (2%)
Strand=Plus/Minus
Query 130549 TTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTTTT 130608
||| ||||||||||| | || || ||||| |||||||| |||| || | || |
Sbjct 334498 TTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGATAATAGACTTTTGCGA 334439
Query 130609 CATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCGCAATCGATTG 130668
|| |||||| | |||||||| | |||| | || | || || ||| | | |||
Sbjct 334438 GATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAATGTTAGGCAAGTTTTG 334379
Query 130669 AACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC---AATCCAAG 130725
|| ||||||| | ||||| | ||| ||| ||||| | ||||| |
Sbjct 334378 AATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGA---ATCGTTCCATAATCCCAT 334322
Query 130726 CTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCG 130785
| || | ||| | | || | | |||| || || || ||||| || | || |
Sbjct 334321 ATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACCGGCTAAAACTCT 334262
Query 130786 TCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGC 130845
||| ||||| || ||| | |||||||| |||| |||| || || ||||| |
Sbjct 334261 TCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGAGA 334202
Query 130846 TGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGAT 130905
|| | || || ||||| ||| ||||||| ||| || | | ||| | | | ||
Sbjct 334201 AGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACCAAACTTGGAAAT 334142
Query 130906 TTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATC 130965
||| ||| ||| ||||||||||||||| ||| || || || ||||| |||
Sbjct 334141 CTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTT---CTTACCCCACAAATC 334085
Query 130966 AAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCTTCGAC 131025
|||||||| || |||| ||| || ||| | |||| | | ||| || || || ||
Sbjct 334084 AAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAAC 334025
Query 131026 ACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTT 131085
||||| || | ||||||||||| | ||| || || ||||| ||||||| |
Sbjct 334024 TTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTAT 333965
Query 131086 ATTTAATTGTTTCGCTTGG 131104
|||| || | | || |||
Sbjct 333964 GTTTAGTTCTCTAGCCTGG 333946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934208381144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |