Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4 102 7e-17 >seq4 Length=942658 Score = 102 bits (112), Expect = 7e-17 Identities = 359/559 (64%), Gaps = 9/559 (2%) Strand=Plus/Minus Query 130549 TTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTTTT 130608 ||| ||||||||||| | || || ||||| |||||||| |||| || | || | Sbjct 334498 TTGAGATTGATCAATGTAGGCACCTCTGTCGGCAGCCATATCGATAATAGACTTTTGCGA 334439 Query 130609 CATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTATGCGCGCAATCGATTG 130668 || |||||| | |||||||| | |||| | || | || || ||| | | ||| Sbjct 334438 GATTTCCCAAACTGTCTTGTAGATATCCTTGATTTCTTGTGGAATGTTAGGCAAGTTTTG 334379 Query 130669 AACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTAC---AATCCAAG 130725 || ||||||| | ||||| | ||| ||| ||||| | ||||| | Sbjct 334378 AATCGACCCGTTGTCAGAAATAATGTGGTTCTTCATGGA---ATCGTTCCATAATCCCAT 334322 Query 130726 CTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCG 130785 | || | ||| | | || | | |||| || || || ||||| || | || | Sbjct 334321 ATCAACCAAGTCTCTCAACATGTAAGGGTTAACAATCTGGAACTCACCGGCTAAAACTCT 334262 Query 130786 TCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGC 130845 ||| ||||| || ||| | |||||||| |||| |||| || || ||||| | Sbjct 334261 TCTGGAATAAATATTAGAGGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGAGA 334202 Query 130846 TGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGAT 130905 || | || || ||||| ||| ||||||| ||| || | | ||| | | | || Sbjct 334201 AGTGGAGGCAGTTGGCATTGGTGCAACTAATAAAGAGTTTCTCAAACCAAACTTGGAAAT 334142 Query 130906 TTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATC 130965 ||| ||| ||| ||||||||||||||| ||| || || || ||||| ||| Sbjct 334141 CTTTTCCTTTAATCCATCCCAATCCCATAAGTCGGTTGGCTT---CTTACCCCACAAATC 334085 Query 130966 AAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCTTCGAC 131025 |||||||| || |||| ||| || ||| | |||| | | ||| || || || || Sbjct 334084 AAATTGTAATAAACCTTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAAC 334025 Query 131026 ACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTT 131085 ||||| || | ||||||||||| | ||| || || ||||| ||||||| | Sbjct 334024 TTTGGCCAGCTCAATACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTAT 333965 Query 131086 ATTTAATTGTTTCGCTTGG 131104 |||| || | | || ||| Sbjct 333964 GTTTAGTTCTCTAGCCTGG 333946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934208381144