Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq4 221 2e-52
seq5 105 8e-18
seq1 82.4 1e-10
>seq4
Length=942658
Score = 221 bits (244), Expect = 2e-52
Identities = 1040/1632 (64%), Gaps = 41/1632 (3%)
Strand=Plus/Minus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428
|| ||||| || ||||| | ||| | |||||| | || | |||||| || | || ||
Sbjct 334593 TAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTTA 334534
Query 110429 GACATCGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG-CGC 110485
||| || || |||| |||| ||||||||||||| ||| |||||| || | |
Sbjct 334533 CCCATGGTAGGGTTCTTTAGGTGAAT--GTTCATACTTTGAGATTGATCAATGTAGGCAC 334476
Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545
| | || | || |||||||| || | | ||| | |||||||||||||| |||
Sbjct 334475 CTCTGTCG-GCAGCCATATCGATAATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAG 334417
Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605
| || |||||| || | ||| || | | | || || || || |||| |||
Sbjct 334416 ATATCCTTGATTTCTTGTGGAATGTTAGGCAAGTTTTGAATCGA----CCCGTTGTCAGA 334361
Query 110606 A----TGAGATCCTTCAT---ATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGAC 110658
| || | | |||||| ||| || ||| | || || | | ||| | |
Sbjct 334360 AATAATGTGGTTCTTCATGGAATCGTT---CCATAATCCCATATCAACCAAGTCTCTCAA 334304
Query 110659 GAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGT 110718
| || ||| ||||| |||||||| || | |||||| || || || |
Sbjct 334303 CATGTAAGGGTTAACAATCTGGAACTCACCGGCTAAAACTCTTCTGGAATAAATATTAGA 334244
Query 110719 TGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 110778
|||||||||||||| |||||||| | |||||| ||||| | |||||||| ||||||||
Sbjct 334243 GGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGTTGGCAT 334184
Query 110779 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATC 110838
|||||| | || | | ||| | | ||| || || |||||| | ||||
Sbjct 334183 TGGTGCAACTAATAAAGAGTTTCTCAAACCAAACTTGGAAATCTTTTCCTTTAATCCATC 334124
Query 110839 CCAGTCGTAGTTGA-GCTTGGTTTCACCTT--CCCACATGTCAAACTGAAGCACCCCTTG 110895
||| || | | | |||| ||| || |||||| ||||| || | | |||||
Sbjct 334123 CCAATCCCATAAGTCGGTTGGCTTC---TTACCCCACAAATCAAATTGTAATAAACCTTG 334067
Query 110896 GGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 110955
|| ||||| || || |||||||||| | ||| | ||| |||| ||| ||
Sbjct 334066 ACTTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAATACT 334007
Query 110956 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 111015
|| |||| || ||||| || || |||||||| || | || | || | || |
Sbjct 334006 AGCTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGCCTG 333947
Query 111016 ATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075
| |||||||||| | | ||| || || |||| || | ||||||||| || |
Sbjct 333946 GGCAGAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCCAAC 333887
Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 111135
| |||| ||||||| || ||| || || ||| || ||||| |||||| | |||||
Sbjct 333886 AGCAATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTTTCT 333827
Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 111195
||| |||| || | ||| |||| ||||| || || |||||||| | ||| ||| |
Sbjct 333826 GTCGATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATTTCTCAAA 333767
Query 111196 ATCAAA--AGTGCGAGTCT-CTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAA 111249
| | | | |||| | | ||| | ||| | ||| | || | |||||| ||
Sbjct 333766 GTTATACCACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAATGCAACTGATGCTAA 333707
Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309
|| |||||||| || || | ||| || | ||| || ||| | || ||
Sbjct 333706 GTTACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGATTAGA 333647
Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369
| || ||| | ||||| |||| |||||| ||| ||||||| |||||||| || ||
Sbjct 333646 AGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCCTGTTGCATGCATCCTTATAAAG 333587
Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGG 111428
|||| | || || || || || ||||||| || | ||||| | ||| || | | |
Sbjct 333586 CATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTTTTGAGC 333527
Query 111429 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488
|| | | ||| | | | || || || || ||| ||| | |||| || |
Sbjct 333526 CTTG-ATGGTGGATCTACCTCTACCTTCTTTTTCATATTTTTCGTATAATTCTTCGAATT 333468
Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548
| ||||| | || | |||||| || | ||| | ||||||| |||||
Sbjct 333467 CATCACCATAAACATCACTCAAACCTGGGGCTTCACTTGGTGAAAAAAGAGTCCATTCTT 333408
Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608
| | ||||| | ||||||||| | || | |||||| | | | || | |||||
Sbjct 333407 GATTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATCTC 333348
Query 111609 TA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667
| | | || ||||| | ||| ||||| || | |||| || || | |||||
Sbjct 333347 TTGCTCTGATT-TCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATCT 333289
Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 111723
|||||||||||||| ||||| | || | | || |||| | || | ||||||
Sbjct 333288 GCGTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTGTTACC-ACCTTGATC 333230
Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783
||||| | || || |||||| || | || ||||||||| ||||| | ||| |||
Sbjct 333229 GACATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATGTACC 333170
Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843
|| || || |||| ||| | | ||| | || || ||||| | ||||||||
Sbjct 333169 GTTGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATACC 333110
Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903
||||| ||| || || | ||||| | | | || |||| ||||| | || ||
Sbjct 333109 ACCAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAGA 333050
Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963
|| || | | || | | ||| ||| ||||| || |||||| |||||||||||
Sbjct 333049 ATCATCTTGCATAGCAACTAAGAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCATT 332990
Query 111964 GAAGAGGGTTGG 111975
|| | |||||
Sbjct 332989 AAACAAAGTTGG 332978
>seq5
Length=831479
Score = 105 bits (116), Expect = 8e-18
Identities = 377/582 (65%), Gaps = 13/582 (2%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | ||| ||||||| | |||| | ||| || || || | ||||
Sbjct 304989 GCAAAATCGGTGTGTAAACCTTCATCTCTGCAAATTAATTCGTTGGAAAATGTCAAACCT 304930
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777
||||| | ||| | || |||||||| |||| | ||| || || |||||||| |||||
Sbjct 304929 GGCATCAAACCTCTTTTTTTCAACCAGAAAATGGAAGCA-AACGATCCGGAGAAAAAGAT 304871
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA 122837
||| || ||| ||||| |||| | | ||| |||| | | ||| |||| |
Sbjct 304870 ACCTTCAACAGCGGCAAAGGCAACTAATCTTTCACCGAATAATGCA---TTTTCATCGCA 304814
Query 122838 C---CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 122894
| ||| |||| ||||| | ||||| | | ||||||||| | ||| ||||| |
Sbjct 304813 CATCCATCTCATGGCCCAGTCGGCCTTTTCTTTAATACATGGAATGTTTTCAATGGCATT 304754
Query 122895 AAATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGT 122954
||||| | | ||| | |||||| | || ||||||||||| || |||||
Sbjct 304753 GAATAAGAATTCCGATTCCTTTGGATCCTTGACATAGGTGTCAATCAATAAGGAGTATGT 304694
Query 122955 TTCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTA 123013
||| ||| | ||| ||| || | ||| | | ||||| | ||||| |
Sbjct 304693 TTCCGAATGGATGTTTTCCATCAT-GATTTGGAAACCATAGAAACACTTGGCTTCAGGGA 304635
Query 123014 TCTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 123073
| || |||||| ||| || || | | | ||| || ||||| ||||| || |||
Sbjct 304634 TTTGCACCTCAGCCGAGAAGTTTTCAACCAAATTTTCGTTGACAATACCATCTGAAGCAG 304575
Query 123074 CAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCAG---GGTCTTCC 123130
|||| || |||| | | ||||| |||| || ||||| || | | ||||
Sbjct 304574 CAAAAAAGGCCAACACTCTGGTAATGAAAAATCTTTCGTTATCATTTAGTCTGTTGTTCC 304515
Query 123131 AGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCAATTGCTCATTTGAGCCT 123190
|||||| | || || ||||| |||| |||||| || ||||| | || ||||
Sbjct 304514 AGTCGTGTAAGTCCTTAGACAAGTCAATTTCTTCGGCGGTCCAGAAAGACGCTTCGGCCT 304455
Query 123191 TTTTATAGAGTTCCCAGAGTTGTGGATACTTCAGGGGGAAGA 123232
|||| || | || ||||| || | || || | |||||||
Sbjct 304454 TTTTGTACATTTGCCAGATTTCATGGTATTTGATTGGGAAGA 304413
>seq1
Length=3254712
Score = 82.4 bits (90), Expect = 1e-10
Identities = 212/318 (67%), Gaps = 5/318 (2%)
Strand=Plus/Minus
Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599
|| |||||||| || | |||||| || | || | |||||| || ||||| || |
Sbjct 1072593 AATCCATCCATTTCAACTAATAATTGGTTCAGGGTGTTTTCTCTTTCGTCATTACCTCCC 1072534
Query 11600 ATACCACCAGCACTGCGT-TG--CTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656
|| || | | | | | || ||| || | ||||| || ||||||| || |||||
Sbjct 1072533 ATTCCCTTACCTTTACCTCTGGACTTTCCGATTGCATCTATTTCATCAACAAAAACAATC 1072474
Query 11657 CATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCA 11716
| || |||||| | ||| ||| || | ||| || || ||| ||||||||||||
Sbjct 1072473 GAAGGAGCATTTTCTCTGGCAGTTTTGAACAAATCACGCACTCTTGATGCACCCACACCA 1072414
Query 11717 ACAAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACC 11775
|||||||| || ||||| | | |||| ||| | | ||||| || | ||||||
Sbjct 1072413 ACAAACATTTCGACAAATTCGGAACCAGA-CACAGAGTAAAATGGAACTCCAGCTTCACC 1072355
Query 11776 CGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCC 11835
||| ||||| ||| | | || || || |||||||| ||| | || ||| ||
Sbjct 1072354 TGCGGTGGCTTTGGCTAATAATGTTTTACCAGTACCTGGTGGACCATTCAAAATGGCACC 1072295
Query 11836 TCGGGGGATCTTGGCACC 11853
|| || || ||||||||
Sbjct 1072294 TCTTGGAATTTTGGCACC 1072277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031709535200
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