Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 132 6e-26 >seq4 Length=942658 Score = 132 bits (146), Expect = 6e-26 Identities = 1020/1633 (62%), Gaps = 41/1633 (3%) Strand=Plus/Minus Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901 ||| ||||| || ||||| | |||| |||||| |||| | |||||| || | || || Sbjct 334594 GTAATACATACCAGTCTTCAATCCCTTCTTCCATCCATAGAAATGCATCGATGTCAGTTT 334535 Query 117902 GGAGAGGGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959 | ||| || |||| |||| |||||||||||| |||||||| ||| || Sbjct 334534 ACCCATGGTAGGGTTCTTTAGGTGAAT--GTTCATACTTTGAGATTGATCAATGTAGGCA 334477 Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAG 118019 || | || || |||||||| || | | ||| | ||||||||| || ||| ||||| Sbjct 334476 CCTCTGTCGGCAGCCATATCGATAATAGACTTTTGCGAGATTTCCCAAACTGTCTTGTAG 334417 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 | | ||| || || | ||| || | | | | ||| || ||| ||||| ||| | Sbjct 334416 ATATCCTTGATTTCTTGTGGAATGTT-AGGCAAGTTTTGA---ATCGACCCG--TTGTCA 334363 Query 118080 ------ATGAGATCCTTCAT---ATCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTC 118129 ||| | | |||||| ||| || ||| | || || | | || ||| Sbjct 334362 GAAATAATGTGGTTCTTCATGGAATCGTT---CCATAATCCCATATCAACCAAGTCTCTC 334306 Query 118130 CACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATA 118187 || | | | ||| |||| |||||||| || | | ||| ||| ||| Sbjct 334305 AACATGTAAGGGTTA---ACAATCTGGAACTCACCGGCTAAAACTCTTCTGGAATAAATA 334249 Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 || | |||||||| ||||| || ||||||| |||||| ||||| | |||||||| || Sbjct 334248 TTAGAGGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGAGAAGTGGAGGCAGTT 334189 Query 118248 GGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAG 118306 ||||| ||||| | | | || | ||| | | ||| | ||| |||||| | Sbjct 334188 GGCATTGGTGCAACTAATAAAGA-GTTTCTCAAACCAAACTTGGAAATCTTTTCCTTTAA 334130 Query 118307 AGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 118366 | ||||| || | | ||| || | ||||| |||||| || | | ||| Sbjct 334129 TCCATCCCAATCCCATAAGTCGGTTGGCTTCTTACCCCACAAATCAAATTGTAATAAACC 334070 Query 118367 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 118426 ||| ||||| || || || | || |||||||| || ||||| | |||| || Sbjct 334069 TTGACTTGCTGGAGAGCCTTCGTAGGTTTCATATGGACCGTCAACTTTGGCCAGCTCAAT 334010 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 || || || | | ||||| || || ||||||||||| | || | | | | || Sbjct 334009 ACTAGCTTCCAATGAAGCGTGGTATATAGTTTCAAAAATTTGTATGTTTAGTTCTCTAGC 333950 Query 118487 CTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACC 118546 || | | |||||||| | | || ||| || || |||| || | |||||| || || Sbjct 333949 CTGGGCAGAATCAAATGGCAATCTTAACATCATGAAGGCATCAGCTAAACCTTGAACCCC 333890 Query 118547 GAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATT 118606 | ||||||| | | |||||| || || | | ||| || || |||||| | || Sbjct 333889 AACAGCAATTGGTCTGTTTCTCATGTTGGATCTTCTAGCTTCTTCAACCGGATAATAGTT 333830 Query 118607 CCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTC 118666 || ||||| | | |||| | ||| |||| ||||| || || |||||||| | || || Sbjct 333829 TCTGTCGATGATCTTATTCAAATTCTTGGCAACAACTTTGGTTATTTCATGTAATTTCTC 333770 Query 118667 GTAATCAAA--ACTGCGAG-TCTCTTCA---TTGACATACTTAGGAAGGGCGATTGACGC 118720 | | | | || ||| | || ||| | ||| | || | || | ||| || Sbjct 333769 AAAGTTATACCACGATGAGTTTTCATCACTTTCAACAAATGCTGGTAATGCAACTGATGC 333710 Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT 118780 | ||||| |||| || || || ||| || | ||| || |||| || Sbjct 333709 TAAGTTACAAACAGCAACTTCTTCTGGGGAAGAGTATTCAACAATCTCACAACACAGATT 333650 Query 118781 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 118840 ||| || || | |||||||||| ||| || || || |||| || |||||||| || Sbjct 333649 AGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTCCTGTTGCATGCATCCTTATA 333590 Query 118841 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGC 118900 ||||||| |||| || || || || || || | | | ||||| | ||| | | Sbjct 333589 AAGCATGAATGGTGTACCGGTTTCTGTCTGTGCTTCCAAAATAGAGTACCATAATTTTTG 333530 Query 118901 AGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAA 118960 ||| | |||| | ||| || |||| || || ||| ||| | |||| || Sbjct 333529 AGCCTTGATGGTGGATCTACCTCTACCTTCTTTTTCATATTTTTCGTATAATTCTTCGAA 333470 Query 118961 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 119020 || ||||| | || | ||||| || | | ||| | || |||| ||||| Sbjct 333469 TTCATCACCATAAACATCACTCAAACCTGGGGCTTCACTTGGTGAAAAAAGAGTCCATTC 333410 Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080 | | ||||| | ||||||||| | || | ||||| | || | ||| | ||| Sbjct 333409 TTGATTGTTTTCAACTCTCTTCATGAATAAATCAGAAATCCATAATGCAGGGAACAAATC 333350 Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140 | | |||||| | || || || | | || | |||||| | ||||| Sbjct 333349 TCTTGCTCTGATTTCTTCCTTACCATGGTTTTTTCTAATGTCAATAAAGTCTAAAATATC 333290 Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGT 119196 |||||||| || || || || | || | | ||| ||| | |||| | || | Sbjct 333289 TGCGTGCCATGGCTCGAGATATAAAGCAAAGGCACCAGGTCTTTTG-TTACCACCTTGAT 333231 Query 119197 TTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGC 119256 ||||| || || || |||||| || | || ||||||||||||||| | |||| | Sbjct 333230 CGACATATCTAGCGGTATTGTTAAACACTCTAACCATTGGAATGATACCGTTGGATGTAC 333171 Query 119257 CATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATAC 119316 | || || || |||| ||| | | ||| | || ||| ||||| | |||||||| Sbjct 333170 CGTTGGTACCTGCAATATAAGAACCGGTCGATCTAATATTGTGAATGTGTAAACCAATAC 333111 Query 119317 CCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 119376 | || || ||| || || | || || | | | | | || || || || || | Sbjct 333110 CACCAGCAGTCTTGGAAATCAGAGCACATTGTTTTAAGGTATCATAAATACCTTCAATAG 333051 Query 119377 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGT 119436 | ||| | | | || | | ||| || ||||||||| || || |||||||| | Sbjct 333050 AATCATCTTGCATAGCAACTAAGAAACAAGAAGACATTTGATTTCTTGGGGTACCAGCAT 332991 Query 119437 TGAAGAGAGTTGG 119449 | || | |||||| Sbjct 332990 TAAACAAAGTTGG 332978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434913973720