Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4 239 5e-58
>seq4
Length=942658
Score = 239 bits (264), Expect = 5e-58
Identities = 1038/1631 (64%), Gaps = 37/1631 (2%)
Strand=Plus/Plus
Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389
||||| | || ||||||||||| |||||| |||||||| ||| ||| | | ||
Sbjct 332978 CCAACTTTGTTTAATGCTGGTACCCCAAGAAATCAAATGTCTTCTTGTTTCTTAGTTGCT 333037
Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449
| | || || || || | ||||| |||| || | | | ||||| | || ||
Sbjct 333038 ATGCAAGATGATTCTATTGAAGGTATTTATGATACCTTAAAACAATGTGCTCTGATTTCC 333097
Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509
||| ||||| |||||||| | ||||| || || | ||| | | ||| ||||
Sbjct 333098 AAGACTGCTGGTGGTATTGGTTTACACATTCACAATATTAGATCGACCGGTTCTTATATT 333157
Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569
|| || || ||| ||| | ||||| ||||||||| || | || |||||| ||
Sbjct 333158 GCAGGTACCAACGGTACATCCAACGGTATCATTCCAATGGTTAGAGTGTTTAACAATACC 333217
Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625
|| | ||||| |||||| ||| | |||| || | | || | ||||| ||
Sbjct 333218 GCTAGATATGTCGATCAAGGTGGTAA-CAAAAGACCTGGTGCCTTTGCTTTATATCTCGA 333276
Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685
|||||||||||| ||||| | || || |||| | | ||||| ||| | || ||
Sbjct 333277 GCCATGGCACGCAGATATTTTAGACTTTATTGACATTAGAAAAAACCATGGTAAGGAAGA 333336
Query 104686 GGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744
| | || | ||| | ||| | || | |||||| | ||| | |||||||||||||
Sbjct 333337 AAT-CAGAGCAAGAGATTTGTTCCCTGCATTATGGATTTCTGATTTATTCATGAAGAGAG 333395
Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATG 104804
|||| | | | | ||| |||| |||| ||| | || || ||| | ||||
Sbjct 333396 TTGAAAACAATCAAGAATGGACTCTTTTTTCACCAAGTGAAGCCCCAGGTTTGAGTGATG 333455
Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864
||||| || || |||| | ||| ||| || || |||||||| | | |
Sbjct 333456 TTTATGGTGATGAATTCGAAGAATTATACGAAAAATATGAAAAAGAAGGTAGAGGTAGAT 333515
Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924
| || | ||| | | ||| | ||||| | | | || || || || ||||
Sbjct 333516 CCACCATCAAGGCTCAAAAATTATGGTACTCTATTTTGGAAGCACAGACAGAAACCGGTA 333575
Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984
|||||| ||||||||| || || || || ||| || || ||| |||| ||||||
Sbjct 333576 CACCATTCATGCTTTATAAGGATGCATGCAACAGGAAATCCAACCAACAGAACTTGGGTA 333635
Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044
||||||| ||| ||||| ||| || || | |||| | | ||| || |
Sbjct 333636 TGATCAAATCTTCTAATCTGTGTTGTGAGATTGTTGAATACTCTTCCCCAGAAGAAGTTG 333695
Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT 105104
|||| |||||| | |||||| | || | || | ||| || || ||| |||
Sbjct 333696 CTGTTTGTAACTTAGCATCAGTTGCATTACCAGCATTTGTTGAAAGTGATGAAAACTCAT 333755
Query 105105 T------TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACA 105158
| | | ||| ||| | || ||| | || ||| ||| |||| || | || |
Sbjct 333756 CGTGGTATAACTTTGAGAAATTACATGAAATAACCAAAGTTGTTGCCAAGAATTTGAATA 333815
Query 105159 GAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACC 105218
| || || ||||| | ||| || ||||| ||| | | ||| || |||||| ||
Sbjct 333816 AGATCATCGACAGAAACTATTATCCGGTTGAAGAAGCTAGAAGATCCAACATGAGAAACA 333875
Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCAT 105278
| ||||||| | | || ||||| ||| | || |||| ||||| | | | |||
Sbjct 333876 GACCAATTGCTGTTGGGGTTCAAGGTTTAGCTGATGCCTTCATGATGTTAAGATTGCCAT 333935
Query 105279 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338
||||||| | | | || | ||| | || | || ||||| || || || |||||
Sbjct 333936 TTGATTCTGCCCAGGCTAGAGAACTAAACATACAAATTTTTGAAACTATATACCACGCTT 333995
Query 105339 CTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398
| | || || ||| ||| |||| | ||||| |||||||||||||||| || || |
Sbjct 333996 CATTGGAAGCTAGTATTGAGCTGGCCAAAGTTGACGGTCCATATGAAACCTACGAAGGCT 334055
Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA--CCAAGCTTC- 105455
||||||| ||||| | | ||||||||| ||||| ||| ||| |||| | |
Sbjct 334056 CTCCAGCAAGTCAAGGTTTATTACAATTTGATTTGTGG---GGTAAGAAGCCAACCGACT 334112
Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515
| || ||||| | | |||||| || || ||| | | ||| | |
Sbjct 334113 TATGGGATTGGGATGGATTAAAGGAAAAGATTTCCAAGTTTGGTTTGAGAAACTCTTTAT 334172
Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575
| | || ||||||||||| |||||||| | ||||| |||||| | |||||||| ||||
Sbjct 334173 TAGTTGCACCAATGCCAACTGCCTCCACTTCTCAAATTTTGGGTTACAATGAATGTTTTG 334232
Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635
|||| ||||| | || || ||| |||||| | || || ||||| |||||| |
Sbjct 334233 AACCATACACCTCTAATATTTATTCCAGAAGAGTTTTAGCCGGTGAGTTCCAGATTGTTA 334292
Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT---ATGAAGG 105692
|| | | || ||| | || || || | ||| || ||| ||||||
Sbjct 334293 ACCCTTACATGTTGAGAGACTTGGTTGATATGGGATTATGG---AACGATTCCATGAAGA 334349
Query 105693 ATCTCA----TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAA 105748
| | || | ||| | |||| || |||||||| | | |||||| | |||
Sbjct 334350 ACCACATTATTTCTGACAACGGG----TCGATTCAAAACTTGCCTAACATTCCACAAGAA 334405
Query 105749 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCC 105808
|| ||| | | ||| ||||||||||||||| | ||| | | || || |||||
Sbjct 334406 ATCAAGGATATCTACAAGACAGTTTGGGAAATCTCGCAAAAGTCTATTATCGATATGGCT 334465
Query 105809 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAG--TC 105866
|| || | ||| || |||||||||| |||||||||||| |||| |||| |
Sbjct 334466 GCCGACAGAGGTGCCTACATTGATCAATCTCAAAGTATGAA--CATTCACCTAAAGAACC 334523
Query 105867 CAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGG 105926
| || ||| || || | || ||||| | || | ||||||||||| | || || |
Sbjct 334524 CTACCATGGGTAAACTGACATCGATGCATTTCTATGGATGGAAGAAGGGATTGAAGACTG 334583
Query 105927 GGATGTATTAC 105937
| |||||||||
Sbjct 334584 GTATGTATTAC 334594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260530241880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |