Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 239 5e-58 >seq4 Length=942658 Score = 239 bits (264), Expect = 5e-58 Identities = 1038/1631 (64%), Gaps = 37/1631 (2%) Strand=Plus/Plus Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389 ||||| | || ||||||||||| |||||| |||||||| ||| ||| | | || Sbjct 332978 CCAACTTTGTTTAATGCTGGTACCCCAAGAAATCAAATGTCTTCTTGTTTCTTAGTTGCT 333037 Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449 | | || || || || | ||||| |||| || | | | ||||| | || || Sbjct 333038 ATGCAAGATGATTCTATTGAAGGTATTTATGATACCTTAAAACAATGTGCTCTGATTTCC 333097 Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509 ||| ||||| |||||||| | ||||| || || | ||| | | ||| |||| Sbjct 333098 AAGACTGCTGGTGGTATTGGTTTACACATTCACAATATTAGATCGACCGGTTCTTATATT 333157 Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || || || ||| ||| | ||||| ||||||||| || | || |||||| || Sbjct 333158 GCAGGTACCAACGGTACATCCAACGGTATCATTCCAATGGTTAGAGTGTTTAACAATACC 333217 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625 || | ||||| |||||| ||| | |||| || | | || | ||||| || Sbjct 333218 GCTAGATATGTCGATCAAGGTGGTAA-CAAAAGACCTGGTGCCTTTGCTTTATATCTCGA 333276 Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685 |||||||||||| ||||| | || || |||| | | ||||| ||| | || || Sbjct 333277 GCCATGGCACGCAGATATTTTAGACTTTATTGACATTAGAAAAAACCATGGTAAGGAAGA 333336 Query 104686 GGCGCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744 | | || | ||| | ||| | || | |||||| | ||| | ||||||||||||| Sbjct 333337 AAT-CAGAGCAAGAGATTTGTTCCCTGCATTATGGATTTCTGATTTATTCATGAAGAGAG 333395 Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATG 104804 |||| | | | | ||| |||| |||| ||| | || || ||| | |||| Sbjct 333396 TTGAAAACAATCAAGAATGGACTCTTTTTTCACCAAGTGAAGCCCCAGGTTTGAGTGATG 333455 Query 104805 CCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG 104864 ||||| || || |||| | ||| ||| || || |||||||| | | | Sbjct 333456 TTTATGGTGATGAATTCGAAGAATTATACGAAAAATATGAAAAAGAAGGTAGAGGTAGAT 333515 Query 104865 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 | || | ||| | | ||| | ||||| | | | || || || || |||| Sbjct 333516 CCACCATCAAGGCTCAAAAATTATGGTACTCTATTTTGGAAGCACAGACAGAAACCGGTA 333575 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 |||||| ||||||||| || || || || ||| || || ||| |||| |||||| Sbjct 333576 CACCATTCATGCTTTATAAGGATGCATGCAACAGGAAATCCAACCAACAGAACTTGGGTA 333635 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 ||||||| ||| ||||| ||| || || | |||| | | ||| || | Sbjct 333636 TGATCAAATCTTCTAATCTGTGTTGTGAGATTGTTGAATACTCTTCCCCAGAAGAAGTTG 333695 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT 105104 |||| |||||| | |||||| | || | || | ||| || || ||| ||| Sbjct 333696 CTGTTTGTAACTTAGCATCAGTTGCATTACCAGCATTTGTTGAAAGTGATGAAAACTCAT 333755 Query 105105 T------TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACA 105158 | | | ||| ||| | || ||| | || ||| ||| |||| || | || | Sbjct 333756 CGTGGTATAACTTTGAGAAATTACATGAAATAACCAAAGTTGTTGCCAAGAATTTGAATA 333815 Query 105159 GAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACC 105218 | || || ||||| | ||| || ||||| ||| | | ||| || |||||| || Sbjct 333816 AGATCATCGACAGAAACTATTATCCGGTTGAAGAAGCTAGAAGATCCAACATGAGAAACA 333875 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCAT 105278 | ||||||| | | || ||||| ||| | || |||| ||||| | | | ||| Sbjct 333876 GACCAATTGCTGTTGGGGTTCAAGGTTTAGCTGATGCCTTCATGATGTTAAGATTGCCAT 333935 Query 105279 TTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCG 105338 ||||||| | | | || | ||| | || | || ||||| || || || ||||| Sbjct 333936 TTGATTCTGCCCAGGCTAGAGAACTAAACATACAAATTTTTGAAACTATATACCACGCTT 333995 Query 105339 CTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398 | | || || ||| ||| |||| | ||||| |||||||||||||||| || || | Sbjct 333996 CATTGGAAGCTAGTATTGAGCTGGCCAAAGTTGACGGTCCATATGAAACCTACGAAGGCT 334055 Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA--CCAAGCTTC- 105455 ||||||| ||||| | | ||||||||| ||||| ||| ||| |||| | | Sbjct 334056 CTCCAGCAAGTCAAGGTTTATTACAATTTGATTTGTGG---GGTAAGAAGCCAACCGACT 334112 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | || ||||| | | |||||| || || ||| | | ||| | | Sbjct 334113 TATGGGATTGGGATGGATTAAAGGAAAAGATTTCCAAGTTTGGTTTGAGAAACTCTTTAT 334172 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | || ||||||||||| |||||||| | ||||| |||||| | |||||||| |||| Sbjct 334173 TAGTTGCACCAATGCCAACTGCCTCCACTTCTCAAATTTTGGGTTACAATGAATGTTTTG 334232 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 |||| ||||| | || || ||| |||||| | || || ||||| |||||| | Sbjct 334233 AACCATACACCTCTAATATTTATTCCAGAAGAGTTTTAGCCGGTGAGTTCCAGATTGTTA 334292 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT---ATGAAGG 105692 || | | || ||| | || || || | ||| || ||| |||||| Sbjct 334293 ACCCTTACATGTTGAGAGACTTGGTTGATATGGGATTATGG---AACGATTCCATGAAGA 334349 Query 105693 ATCTCA----TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAA 105748 | | || | ||| | |||| || |||||||| | | |||||| | ||| Sbjct 334350 ACCACATTATTTCTGACAACGGG----TCGATTCAAAACTTGCCTAACATTCCACAAGAA 334405 Query 105749 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCC 105808 || ||| | | ||| ||||||||||||||| | ||| | | || || ||||| Sbjct 334406 ATCAAGGATATCTACAAGACAGTTTGGGAAATCTCGCAAAAGTCTATTATCGATATGGCT 334465 Query 105809 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAG--TC 105866 || || | ||| || |||||||||| |||||||||||| |||| |||| | Sbjct 334466 GCCGACAGAGGTGCCTACATTGATCAATCTCAAAGTATGAA--CATTCACCTAAAGAACC 334523 Query 105867 CAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGG 105926 | || ||| || || | || ||||| | || | ||||||||||| | || || | Sbjct 334524 CTACCATGGGTAAACTGACATCGATGCATTTCTATGGATGGAAGAAGGGATTGAAGACTG 334583 Query 105927 GGATGTATTAC 105937 | ||||||||| Sbjct 334584 GTATGTATTAC 334594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260530241880