Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01] 37 sequences; 10,714,862 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1 104 1e-17 >seq1 Length=3254712 Score = 104 bits (114), Expect = 1e-17 Identities = 353/541 (65%), Gaps = 19/541 (4%) Strand=Plus/Minus Query 64847 TCAATGATTTCTAACGGATTATAACACATAATGTCAGTACTAAATCCTGTGCCAATACCC 64906 |||||||| || | || ||| || | ||| ||||| | || || || ||||| Sbjct 677601 TCAATGATATCAACAGGGTTAAAAGATGGAATACTCGTACTCCAACCAGTACCGATACCT 677542 Query 64907 TTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATG 64966 | | ||||| | || |||||| || | |||||| | ||| | ||||||||| | Sbjct 677541 TCACAACCATTCACTAGAATCATTGGTAAAATTGGAGTATACCATTCAGGCTCAACGGTT 677482 Query 64967 AGACCATCATCATCCAAATACTTCAAAATGGCATCATCCTCTT--TTGGAAA--TATAGA 65022 | ||||||| | |||||| ||||| | | || |||| ||| ||| | | | Sbjct 677481 TGCTCATCATCCTGCAAATAATTCAATAACGGATTATCCAAAGGATTGAAAACTTTTTTA 677422 Query 65023 ACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCAGT 65082 || | ||| || ||| |||| ||||||||||| | | || |||| ||| Sbjct 677421 GTGATTGATTGTA----ATTCAGTAAAAATATATCTTGCAGCCGCAGCATCTTTACCACC 677366 Query 65083 TCG---TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAAT 65139 | | || | ||||| ||||| ||| || || | || | ||| || ||||||| Sbjct 677365 TTGAGCTCTAGAACCAAATCCACCATGTGGTATCAAAATGTTTAAATTATTAGAACCAAC 677306 Query 65140 AAAATTCTGAGCCATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATC 65198 | ||| ||||||| || ||||||| |||| | || ||| ||||| || ||||| | Sbjct 677305 ATAATCTTGAGCCAAACCAATAATTGATTGCA-TCAATGACGCGTCACCATGRTGATAAC 677247 Query 65199 CTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATT-- 65256 ||| |||||| || | ||| || ||||||| || || ||||| | | ||||| Sbjct 677246 CTGTATGTTCYGAAATATAACCTTCTAATTGAGACACCTTAATTTCATCTCTCAAATTAC 677187 Query 65257 -CTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAAT 65315 ||| | | |||| ||| ||| |||| | |||| ||| || |||||||| | | Sbjct 677186 GCTTGTAACATGC-RTATAAAAT-CTTTCTTTGAACT-GGTTTAAAACCATCCATGACAG 677130 Query 65316 TAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATT 65375 |||||| ||| ||||||| | || || || ||||||||||| || || | Sbjct 677129 AAGGAATAGATCTTGCACAATCGGCAATAGAAAACAAGATTAATTCTTTGTTGATGAAAT 677070 Query 65376 C 65376 | Sbjct 677069 C 677069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679893723050