Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sorboxylosa_20[genbank_20GCA_5F001599115.1_202016-03-01]
37 sequences; 10,714,862 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 1e-17
>seq1
Length=3254712
Score = 104 bits (114), Expect = 1e-17
Identities = 353/541 (65%), Gaps = 19/541 (4%)
Strand=Plus/Minus
Query 64847 TCAATGATTTCTAACGGATTATAACACATAATGTCAGTACTAAATCCTGTGCCAATACCC 64906
|||||||| || | || ||| || | ||| ||||| | || || || |||||
Sbjct 677601 TCAATGATATCAACAGGGTTAAAAGATGGAATACTCGTACTCCAACCAGTACCGATACCT 677542
Query 64907 TTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCTCAACAATG 64966
| | ||||| | || |||||| || | |||||| | ||| | ||||||||| |
Sbjct 677541 TCACAACCATTCACTAGAATCATTGGTAAAATTGGAGTATACCATTCAGGCTCAACGGTT 677482
Query 64967 AGACCATCATCATCCAAATACTTCAAAATGGCATCATCCTCTT--TTGGAAA--TATAGA 65022
| ||||||| | |||||| ||||| | | || |||| ||| ||| | | |
Sbjct 677481 TGCTCATCATCCTGCAAATAATTCAATAACGGATTATCCAAAGGATTGAAAACTTTTTTA 677422
Query 65023 ACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGTGGTCTTGTCCAGT 65082
|| | ||| || ||| |||| ||||||||||| | | || |||| |||
Sbjct 677421 GTGATTGATTGTA----ATTCAGTAAAAATATATCTTGCAGCCGCAGCATCTTTACCACC 677366
Query 65083 TCG---TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAAT 65139
| | || | ||||| ||||| ||| || || | || | ||| || |||||||
Sbjct 677365 TTGAGCTCTAGAACCAAATCCACCATGTGGTATCAAAATGTTTAAATTATTAGAACCAAC 677306
Query 65140 AAAATTCTGAGCCATTCCGATAATTG-CTGCATTTAAACTCGCTTCACCGTGATGATATC 65198
| ||| ||||||| || ||||||| |||| | || ||| ||||| || ||||| |
Sbjct 677305 ATAATCTTGAGCCAAACCAATAATTGATTGCA-TCAATGACGCGTCACCATGRTGATAAC 677247
Query 65199 CTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATT-- 65256
||| |||||| || | ||| || ||||||| || || ||||| | | |||||
Sbjct 677246 CTGTATGTTCYGAAATATAACCTTCTAATTGAGACACCTTAATTTCATCTCTCAAATTAC 677187
Query 65257 -CTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATCCATTAAAT 65315
||| | | |||| ||| ||| |||| | |||| ||| || |||||||| | |
Sbjct 677186 GCTTGTAACATGC-RTATAAAAT-CTTTCTTTGAACT-GGTTTAAAACCATCCATGACAG 677130
Query 65316 TAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTCTTTGTTAATAAATT 65375
|||||| ||| ||||||| | || || || ||||||||||| || || |
Sbjct 677129 AAGGAATAGATCTTGCACAATCGGCAATAGAAAACAAGATTAATTCTTTGTTGATGAAAT 677070
Query 65376 C 65376
|
Sbjct 677069 C 677069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235679893723050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |